Streptomyces pactum: B1H29_02340
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Entry
B1H29_02340 CDS
T07142
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spac03021
]
B1H29_02340
Transcription machinery [BR:
spac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H29_02340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_Crp_2
HTH_23
MarR_2
MarR
HTH_3
HTH_24
HTH_Tnp_4
GerE
HTH_37
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AQS65927
UniProt:
A0A1S6J2E9
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All DBs
Position
541708..542553
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AA seq
281 aa
AA seq
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MTTTTARVTEHTSTGMPEVADPSKVAPKDARELSKLFFQQLTVLEEGTPEYQYARNTLIE
MNMSLVRFAAGRFRSRGPEEMEDIVQVGMIGLIKAIDRFELTREVEFTSFAVPYIVGEIK
RFFRDTSWAVHVPRRLQEARVQLARATEELRSRLGRNPTTSELSELMCLPEDEVVEARLA
ANGYNSASLDAAINGSEDGESALADFIGADDAALGLVDDFHALAPMIAELDERDRQIIHW
RFVEELTQKDIGERLGVSQMHVSRLISRLLARLREGMLSDH
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacgaccgcacgggtcaccgagcacaccagcacgggcatgccggaggtagcg
gacccgtccaaggtggcgcccaaggacgcgcgggagttgtcgaagctgttcttccagcag
ctcacggttctcgaagagggcacgcccgaataccagtacgcgcgcaacacgctgatcgag
atgaacatgtccctggtccgcttcgcggccggccggttccgcagccgcgggccggaggag
atggaggacatcgtccaggtcggcatgatcgggctgatcaaggccatcgaccggttcgag
ttgacccgcgaggtcgagttcacctccttcgccgtgccgtacatcgtcggcgagatcaag
cggttcttccgtgacacctcgtgggccgtgcacgtgccccggcgcctccaggaggcccgt
gtccagttggcccgggccaccgaggagctgcgcagccgccttggccgcaaccccaccacc
agtgaactgtccgagctgatgtgcctcccggaggacgaggtcgtcgaggcccggctggcg
gccaacggctacaactccgcctcgctggacgcggccatcaacggcagcgaggacggcgag
tcggccctggcggacttcatcggtgcggacgacgccgcgctggggctcgtggacgacttc
cacgccctggccccgatgatcgccgagctggacgaacgcgaccggcagatcatccactgg
cgcttcgtcgaggagctcacccagaaggacatcggtgaacgcctcggggtctcgcagatg
catgtgtcccggctgatctcgcggctgctggcccgcctgcgggagggcatgctcagcgac
cactga
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