KEGG   Streptomyces pactum: B1H29_02340
Entry
B1H29_02340       CDS       T07142                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
spac  Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:spac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spac03021]
    B1H29_02340
Transcription machinery [BR:spac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B1H29_02340
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 KORA HTH_Crp_2 HTH_23 MarR_2 MarR HTH_3 HTH_24 HTH_Tnp_4 GerE HTH_37 HTH_38
Other DBs
NCBI-ProteinID: AQS65927
UniProt: A0A1S6J2E9
LinkDB
Position
541708..542553
AA seq 281 aa
MTTTTARVTEHTSTGMPEVADPSKVAPKDARELSKLFFQQLTVLEEGTPEYQYARNTLIE
MNMSLVRFAAGRFRSRGPEEMEDIVQVGMIGLIKAIDRFELTREVEFTSFAVPYIVGEIK
RFFRDTSWAVHVPRRLQEARVQLARATEELRSRLGRNPTTSELSELMCLPEDEVVEARLA
ANGYNSASLDAAINGSEDGESALADFIGADDAALGLVDDFHALAPMIAELDERDRQIIHW
RFVEELTQKDIGERLGVSQMHVSRLISRLLARLREGMLSDH
NT seq 846 nt   +upstreamnt  +downstreamnt
atgacgacgacgaccgcacgggtcaccgagcacaccagcacgggcatgccggaggtagcg
gacccgtccaaggtggcgcccaaggacgcgcgggagttgtcgaagctgttcttccagcag
ctcacggttctcgaagagggcacgcccgaataccagtacgcgcgcaacacgctgatcgag
atgaacatgtccctggtccgcttcgcggccggccggttccgcagccgcgggccggaggag
atggaggacatcgtccaggtcggcatgatcgggctgatcaaggccatcgaccggttcgag
ttgacccgcgaggtcgagttcacctccttcgccgtgccgtacatcgtcggcgagatcaag
cggttcttccgtgacacctcgtgggccgtgcacgtgccccggcgcctccaggaggcccgt
gtccagttggcccgggccaccgaggagctgcgcagccgccttggccgcaaccccaccacc
agtgaactgtccgagctgatgtgcctcccggaggacgaggtcgtcgaggcccggctggcg
gccaacggctacaactccgcctcgctggacgcggccatcaacggcagcgaggacggcgag
tcggccctggcggacttcatcggtgcggacgacgccgcgctggggctcgtggacgacttc
cacgccctggccccgatgatcgccgagctggacgaacgcgaccggcagatcatccactgg
cgcttcgtcgaggagctcacccagaaggacatcggtgaacgcctcggggtctcgcagatg
catgtgtcccggctgatctcgcggctgctggcccgcctgcgggagggcatgctcagcgac
cactga

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