Streptomyces pactum: B1H29_06345
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Entry
B1H29_06345 CDS
T07142
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
B1H29_06345
Enzymes [BR:
spac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
B1H29_06345
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Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
AQS66597
UniProt:
A0A1S6J4A0
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Position
complement(1496151..1498025)
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AA seq
624 aa
AA seq
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MRHPHKYRRRPLVLGAALAAAGLVGAGLTTLTADSAEAATARQVEALDRGVVSVHTGDGN
LVSWRWLGTDPDNVSFNVYRAGTRVNSGPVTGTTTYFHPGAPSHADYTVRAVVNGTEQGD
SVHAVQFRAGYKDVPISPPAGGTTPDGVSYTYEANDASVGDLDGDGALDIVLKWQPTNAK
DNSQSGYTGNTIVDGVKLDGTRLWRVDLGRNIRSGAHYTQFQVYDYDGDGTAEVAMKTAD
GTRDGTGAVIGSSSADHRNSSGYILSGPEYLTMFNGQTGKAMGTVDYVPARGNVSSWGDS
YGNRVDRFLAGTAYLDGSRPSLIMARGYYTRSVIAAWDWRDGRFTRRWTFDTNSSTNAGK
GYDGQGNHQLSVADVDGDGKDEIVYGAMAVDDNGWGLWTTRNGHGDAMHVGDLDPSRAGL
EEFKVDEDGSKPSSWMADARTGQIIWSTGAGGDNGRGVSADIWSGSAGAESWSSAESGIR
NPKGTVVHSRKPAGANFLSWWDGDPVRELLDGTRVDKYGTSGDTRLLTGSGVASNNGTKA
TPVLAGDILGDWREEVVWRTSNNTALRIYSTPHDTDRRITTLLHDTQYRTALAWQNTAYN
QPPHPSFFLGDGMATAPRPTVYTP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcacccccacaagtaccgcagacgccccctggtcctcggcgcggccctcgccgcc
gcgggcctcgtcggcgcgggtctgacgacgctcaccgccgacagcgccgaggccgccacg
gcccggcaggtcgaggccctcgaccggggagtggtcagcgtccacaccggtgacggcaac
ctggtgagctggcgctggctcggcaccgacccggacaatgtctcgttcaacgtctaccgg
gccggcacgagggtcaactccggcccggtcaccggcaccaccacctacttccacccggga
gccccctcccacgccgactacacggtccgcgcggtcgtgaacggcacggaacagggcgac
tcggtccacgccgtccagttccgggccggttacaaggacgtccccatcagcccgcccgcc
ggcggtaccacccccgacggcgtctcctacacctacgaggccaacgacgcctccgtcggc
gacctcgacggcgacggagcgctggacatcgtcctcaagtggcagccgaccaacgccaag
gacaactcccagtccggctacacgggcaacacgatcgtggacggcgtcaagctcgacggc
acccggctgtggcgcgtcgacctgggccgcaacatccgctccggtgcccactacacgcag
ttccaggtctacgactacgacggcgacggcacggccgaggtggccatgaagaccgccgac
ggcacgagggacggcaccggggcggtcatcggcagctcctcggccgaccaccgcaactcg
agcggctacatcctgtccggtcccgagtacctgaccatgttcaacgggcagaccggcaag
gccatgggcaccgtcgactacgtccccgcccggggcaacgtctcctcgtggggcgactcc
tacggcaaccgcgtcgaccgcttcctggccggcacggcctacctggacggctcccgtccc
tcactgatcatggcgcgcggctactacacccgctcggtgatcgccgcctgggactggcgc
gacggccgcttcacccgccgctggaccttcgacaccaactcctccaccaacgcgggcaag
ggctacgacggccagggcaaccaccagttgtccgtcgcggacgtcgacggcgacggcaag
gacgagatcgtctacggcgcgatggccgtcgacgacaacggctggggcctgtggaccacg
aggaacggccacggcgacgccatgcacgtcggcgacctcgacccgtcccgcgcgggcctg
gaggagttcaaggtcgacgaggacggctcgaagccgtcgtcgtggatggcggacgcgcgc
accgggcagatcatctggtccaccggtgcgggcggcgacaacggccggggcgtctccgcc
gacatctggtccggcagcgcgggcgccgagtcctggtcgtcggcggagagcggcatccgc
aacccgaagggcacggtggtccacagccgcaagcccgccggcgccaacttcctgtcctgg
tgggacggcgaccccgtccgcgaactcctcgacggcacccgcgtcgacaagtacggcacc
tcgggcgacacccgcctgctcaccggttccggcgtcgcctccaacaacggcacgaaggcc
acgccggtcctggccggggacatcctcggcgactggcgcgaggaggtcgtctggcgcacg
agcaacaacaccgcgctccgtatctactccaccccgcacgacacggaccgcaggatcacg
accctcctccacgacacccagtaccgcacggccctggcctggcagaacaccgcctacaac
cagccgccgcacccgagcttcttcctgggcgacggcatggcgacggcacccaggcccacg
gtgtacacgccctga
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