Streptomyces pactum: B1H29_06515
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Entry
B1H29_06515 CDS
T07142
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spac03021
]
B1H29_06515
Transcription machinery [BR:
spac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H29_06515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_Crp_2
HTH_24
HTH_28
GerE
MarR_2
MarR
HTH_31
HTH_10
HTH_3
UPF0122
DUF134
KORA
Motif
Other DBs
NCBI-ProteinID:
AQS66621
UniProt:
A0A1S6J4I8
LinkDB
All DBs
Position
complement(1587537..1588331)
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AA seq
264 aa
AA seq
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MPIHASAKHPHDDAPDTADAFRRLATLPDGPERDAVRDRIVEAWLPMAERLAGRFRSRGE
SHEDLRQVAALGLVKAVDRYDPERGNAFESYAVPTITGEIKRHFRDHMWTLHVPRRVQDL
RNRVRFAGQDLSQTISGRRPTVAEIAEHADLSEEDVRVGLEALESFTALSLDAELPGSED
GYSLGDALGAFDPALETVVDREAVKDRLAALPERERAILYMRFFDDMTQSRIAEQLGISQ
MHVSRLISRCCNRVREQVLRDPAA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccacgccagcgcgaagcacccgcacgacgacgcccccgacaccgccgacgcc
ttccgccgactcgccacccttcccgacggcccggaacgcgacgcggtccgcgaccggatc
gtcgaggcctggctgcccatggccgaacggctcgcggggcggttccgcagtcgcggtgag
agccacgaggacctgcgccaggtcgcggcgctcggcctggtcaaggccgtcgaccggtac
gaccccgaacgcggcaacgccttcgagagctacgccgtgccgaccatcaccggcgagatc
aagcgccacttccgcgaccacatgtggaccctgcacgtgccgcgccgggtccaggacctg
cgcaaccgtgtgcgcttcgcgggccaggacctgtcccagaccatctccggccgccgtccc
accgtcgcggagatcgccgagcacgccgacctgagcgaggaggacgtccgcgtgggcctg
gaggccctggagagcttcaccgccctgtccctggacgcggaactccccggcagcgaggac
ggctactcactcggtgacgccctcggcgccttcgacccggccctcgagaccgtcgtggac
cgcgaagccgtcaaggaccgactcgcagcgctgcccgagcgggaacgcgccatcctctac
atgcgcttcttcgacgacatgacccagagccgcatcgccgaacagctcggcatctcccag
atgcacgtctcccgcctgatcagccggtgctgcaaccgggtgcgggaacaggtgctccgg
gacccggcggcctga
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