Streptomyces pactum: B1H29_19230
Help
Entry
B1H29_19230 CDS
T07142
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spac03021
]
B1H29_19230
Transcription machinery [BR:
spac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H29_19230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_31
HTH_28
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AQS68780
UniProt:
A0A1S6JAI8
LinkDB
All DBs
Position
complement(4532160..4533080)
Genome browser
AA seq
306 aa
AA seq
DB search
MSADQGSSKVLALAESETAPDTLEALGPVDDVQAIEAVPTLDAVPAQAVPATEAIDTRTL
SRSLFLRLAALDQDSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIK
AIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKL
DRSPTVGELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTAL
EGVEYRESLKPLLAQLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLSQLR
EGLISD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcgcgctcgcggagagcgagaccgcgccc
gacacgctcgaggcgctcggccccgtcgatgacgtccaggccatcgaagccgtaccgacc
ctcgacgccgtgccggcccaggccgttccggccacggaggccatcgacacccgcaccctg
tcccgctccctgttcctgcggctcgccgccctcgaccaggacagcccggagcgcgcctac
gtccgggacaccctgatcgagctcaatctcccgctggtgcgttacgccgccgcgcgcttc
cgctcccgcaacgagccgatggaggacatcgtccaggtcggcaccatcggcctgatcaag
gcgatcgaccgcttcgactgcgaacggggcgtggagttcccgacgttcgcgatgccgacg
gtggtcggggagatcaagcggttcttccgcgacacctcgtggtcggtgcgcgtcccgcgc
cggctccaggagctgcggctggccctgacgaaggccagcgacgagctctcccagaagctg
gaccgctccccgacggtcggcgagctggccgccgtgctgggcgtctccgaggaggacgtc
gtcgacggcctcgcggtcggcaacgcgtacaccgcctcctcgctggactccccggccccg
gaggacgacggcggcgagggctcgctggcggaccgcctggggtacgaggacacggcgctg
gagggcgtggagtaccgcgagtccctcaagccgctgctggcccaattgccgccccgggag
cggcggatcatcatgctgcgcttcttcgccaacatgacccagtcgcagatcggcgaggag
gtcggcatctcgcagatgcacgtctcccggctgctgacccggaccctgtcgcagttgcgc
gagggcctcatctccgactag
DBGET
integrated database retrieval system
