Streptomyces pactum: B1H29_19235
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Entry
B1H29_19235 CDS
T07142
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spac03021
]
B1H29_19235
Transcription machinery [BR:
spac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H29_19235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
MarR_2
MarR
HTH_17
HTH_3
DUF134
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AQS72081
UniProt:
A0A1S6JJY5
LinkDB
All DBs
Position
complement(4533374..4534270)
Genome browser
AA seq
298 aa
AA seq
DB search
MPASTAPQAPPAQAPQAPQAARAAPPAHAAQAQEPPAREAAPQRSRGADTRALTQVLFGE
LKGLTPGSPEHDRVRAALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDP
ERGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTAFGRSPTTA
EIAERLRISEEEVLSCIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALDGVEHRDLV
RHLLVQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFQRLRSSNRIDA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccagtactgcgcctcaagcaccgcccgcacaggccccacaggccccacaggcc
gcacgggccgcaccgcccgcacacgccgcacaggcccaggagccgcccgcgcgggaagcg
gctccgcagcggagccggggcgccgacacccgggccctgacccaggtgctcttcggtgag
ctgaagggcctcacgccgggctcgccggagcacgaccgggtacgcgcggcgctcatcgag
gccaacctcccgctggtgcgctacgccgccgcccgcttccgctcccgcaacgagccgatg
gaggacgtcgtccaggtcggcaccatcggactcatcaacgccatcgaccggttcgacccg
gagcggggcgtgcagttcccgacgttcgcgatgccgaccgtcgtcggcgagatcaagcgg
tacttccgcgacaacgtccgcacggtgcacgtaccgcgccggctgcacgagctgtgggtg
caggtcaacagcgcgaccgaggacctgaccaccgccttcgggcgctccccgacgaccgcc
gagatcgccgagcggctgcgcatctccgaggaggaggtgctgtcctgcatcgaggcgggg
cggtcgtaccacgccacctcactggaggccgcccaggagggcgacggactgcccgggctg
ctcgaccggctcggctacgaggaccccgccctcgacggggtcgagcaccgcgacctggtc
cggcacctgctcgtccagctcccggagcgggaacagcgcatcctgctgctgcgctactac
agcaacctcacccagtcgcagatcagtgcggaactcggcgtctcccagatgcacgtctca
cgactactggcccgtagtttccagcggttgaggtcctccaaccggatcgacgcgtag
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