Streptomyces pactum: B1H29_25150
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Entry
B1H29_25150 CDS
T07142
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
spac
Streptomyces pactum
Pathway
spac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B1H29_25150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spac03021
]
B1H29_25150
Transcription machinery [BR:
spac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H29_25150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_28
PolyA_pol_arg_C
Motif
Other DBs
NCBI-ProteinID:
AQS72223
UniProt:
A0A1S6JKE6
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Position
5880012..5881229
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AA seq
405 aa
AA seq
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MQTQTLTQTDTSTDGAAPDARSGVLVAMPPQHRAVHHPENRPDEPPAADVPEAAGHPGEP
ADAPADGREPADVPADGPDPADVPADGPEPAEPPPPTRTETGGPSSDLFRQYLREIGRIP
LLTAAEEVDLARRVEAGLFAEEKLRLAVDLDSRLALDLDRLVVMGRLAKRRLIEANLRLV
VSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQA
RTIRVPVHVVELINRVVRVQRRMLQERGHEPTAQDVAAHLDLAPERVGEVLRLAQEPVSL
HAPVGEEDDVAFGDLIEDGDAASPVESAAFLLLREHLEAVLSTLGERERKVVQLRYGLVD
GRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHTFADQLRGYLD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacccagaccctcacccagaccgacaccagtaccgacggcgcggcgccggacgcg
cgaagcggcgtcctcgtcgcgatgcccccgcagcaccgcgccgtgcaccaccccgagaac
cggccggacgagccgcccgcggcggacgtccccgaagcggccggccacccgggcgaaccg
gccgacgcccccgccgacggccgggagccggccgacgttcccgccgacggcccggacccg
gccgacgttcccgccgacggccccgagccggccgaaccgccgccgcccacccgcacggag
accggcgggccctcctccgacctgttccggcagtacctgcgggagatcggccggattccg
ctgctcaccgcggccgaggaggtcgacctcgcccggcgcgtggaggccgggctgttcgcc
gaggagaagctgcggctcgccgtcgacctggacagccggctcgccctggacctcgaccgg
ctggtcgtcatgggccgcctggccaagcgccgcctgatcgaggcgaacctgcggctcgtg
gtgtccgtggccaagcgctacgtcggacgggggctgaccatgctcgacctggtccaggag
gggaacctgggcctgatcagggccgtggagaagttcgactacgcccgcggctacaagttc
tccacctacgccacctggtggatccgccaggccatgtcccgggcgctggccgaccaggcg
cgcaccatccgcgtccccgtccacgtcgtggaactgatcaaccgggtcgtccgcgtccag
cggcgcatgctccaggaacgcggccacgagccgaccgcgcaggacgtcgccgcccacctg
gacctggcccccgagcgggtcggcgaggtgctgcgcctcgcccaggagccggtgtccctg
cacgccccggtcggcgaggaggacgacgtcgccttcggggacctgatagaggacggcgac
gccgccagccccgtggagtcggccgcgttcctgctgctgcgcgagcatctggaggcggtg
ctctccaccctcggcgagcgcgagcgcaaggtcgtccagctccgctacggcctggtcgac
ggccgcccccgcacgctggaggagataggccgcatcttcggcgtgacccgcgagcggatc
cgccagatcgagtccaagaccctcaacaaactccgcgaccacaccttcgcggaccagttg
aggggttacctggactga
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