Streptomyces pactum: B1H29_33780
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Entry
B1H29_33780 CDS
T07142
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spac03021
]
B1H29_33780
Transcription machinery [BR:
spac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H29_33780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_Crp_2
KORA
MarR_2
HTH_28
Sigma70_ECF
MarR
DUF6757
YdaS_toxin
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AQS71199
UniProt:
A0A1S6JHJ9
LinkDB
All DBs
Position
7703714..7704580
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AA seq
288 aa
AA seq
DB search
MLIETPTTRPATAEPAHTAAPDRRRHDDAPDTMALFGRLAGLEDGPERDAVRDELVTAWL
PMAHRIAGRFRDRGESIEDLRQVAALGLVKAIDRFDPERGAFESYAVPTITGEVKRHFRD
RMWALRVPRRVQELRNKVRVARRELTQSPGSPEPSVAAVAAHTGLTEDEVSAGMEALESF
STLSLDAELSAGDDGYSLADTLGAADTSYDTVIDRESAKEGLRRLPERERAILYMRFFED
MTQSRIADHLGISQMHVSRLISRSCARVRDEAMGRRPGCRGSGRPVRT
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgaaacacccaccacccgtcccgcgaccgccgagcccgcccacaccgcggct
cccgaccgtcgccggcacgacgacgcccccgacaccatggcgctcttcggccggctggcc
ggcctggaggacgggcccgaacgcgacgccgtccgcgacgaactcgtcacggcctggctg
cccatggcccaccggatcgccgggcgcttccgggaccgcggcgagtccatcgaggacctg
cgccaggtcgcggcgctcggcctggtgaaggccatcgaccgcttcgacccggagcgggga
gccttcgagagctacgccgtgcccaccatcaccggagaggtcaagcgacacttccgggac
cggatgtgggccctgcgggtgccccgccgggtccaggaactgcgcaacaaggtgcgggtg
gcacggcgcgagctcacccagagcccggggagccccgaaccgtccgtcgccgccgtcgcc
gcccacaccggactgaccgaggacgaggtcagcgccggaatggaggcgctggagagcttc
agcacgctgtcgctggacgccgaactgtcggccggcgacgacggctacagcctcgcggac
accctcggcgcggcggacacctcgtacgacaccgtgatcgaccgcgagtccgccaaggag
gggctgcgcaggctgcccgaacgggagcgcgccatcctctacatgcgcttcttcgaggac
atgacgcagagccgtatagccgaccacctcggcatctcccagatgcacgtctcgcggctc
atcagccgtagctgcgcccgcgtgcgcgacgaggcgatgggccgacggccgggctgccgc
gggtccggccggccggtgcgcacctga
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