Streptomyces pactum: B1H29_34330
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Entry
B1H29_34330 CDS
T07142
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spac03021
]
B1H29_34330
Transcription machinery [BR:
spac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H29_34330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
UPF0175
HTH_23
HTH_Crp_2
HTH_37
HTH_3
HTH_31
HTH_24
HNF-1_N
PG_binding_1
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AQS71291
UniProt:
A0A1S6JHQ1
LinkDB
All DBs
Position
complement(7832392..7833105)
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AA seq
237 aa
AA seq
DB search
MAACPAGADREALREAAITAYLPVARRIARRYGSPDRSREDLQQVACLGLVKAVDRYDPG
LGHAFLSYAVPTIDGELKRYLRDFSWQVHVPRRLQDKHRLVRLAQEELNRSGHTDGGTVR
DIQRLTGIDEQDVRLALRADQARNPLSVDEQRGTGKGFTLAETVGGDDPRLELVTDLVAL
KTLVAELPARERAILKLYFVDSLTQRQVADIVGISQMHVSRLLDRSRAFLRRGLLGG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctgtcccgcgggtgccgaccgggaggccctgcgggaggcggccatcacggcg
tacctgccggtcgcccggcggatcgcccggcgctacggctcccccgaccggagccgtgag
gacctccagcaggtggcctgcctcgggctcgtcaaggcggtggaccgctacgaccccggg
ctgggacacgcctttctctcctatgccgtgcccaccatcgacggcgagctgaagcggtat
ctgcgggacttcagttggcaggtccatgtgccgcggcggctgcaggacaagcaccgcctg
gtgcggctcgcgcaggaggagctgaacaggtccgggcacaccgacggcgggaccgtccgg
gacatccagcggctcaccggcatcgacgaacaggacgtgcgtctcgccctgcgggcggac
caggcacgcaaccccctgtccgtggacgagcagcgcggcaccgggaagggcttcaccctc
gcggagaccgtcggcggggacgacccgagactcgaactggtcaccgacctggtggcgctc
aaaaccctcgtcgcggaactgccggcccgggagcgcgccatcctgaagctgtacttcgtc
gactccctgacccagcggcaggtggcggacatcgtcggcatctctcagatgcacgtctcc
cgcctgctggaccggtcacgcgcctttctgcggcgcgggctcctcgggggctga
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integrated database retrieval system