Sphingomonas panacisoli: FPZ24_09115
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Entry
FPZ24_09115 CDS
T07288
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
spai
Sphingomonas panacisoli
Pathway
spai00550
Peptidoglycan biosynthesis
spai01100
Metabolic pathways
spai01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FPZ24_09115 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FPZ24_09115 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spai01011
]
FPZ24_09115 (mrdA)
Enzymes [BR:
spai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FPZ24_09115 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
spai01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FPZ24_09115 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QDZ07630
UniProt:
A0A5B8LKL5
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Position
1782260..1784332
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AA seq
690 aa
AA seq
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MSRPPRPTTAAAQSYSFSRRAMMVGGIQGAVALALAGRMGWLAVAENEHYKLLSESNRVN
LTMIPPRRGWIVDRYGHAIANNRTDFRVDIIRDRLPESEQPRVLKLLQQLLGLPPEQISR
IENDIKRAAGFQPVQVAEKLTPDLFAAVQVRLPELPGVAPTAGYSRNYPAAQAVAHLTGY
VGAASAEQYQKTKDALLITPGFKIGKDGLERALEPKLRGEPGAKRVEVTARGKLVRELET
RPDVAGKVQRLTIDAGLQEYAARRLGTNSGSAVVIDVTSGDVLAFVSMPAYDPNSFSDGI
SHLEWKMLSDNDHVPLMNKVLQGLYPPGSTVKPMNGLALLSNGVSAEETVVCTGALRVGS
GIFHCHSRRGHGALNLKRAIMASCDIYFYEMVRRLGYDHVAPTARMLGLGQKFDLPYSTQ
RYGTVPDSAWKLKKYKQEWTVPDSLNASIGQGYVLANPLQLAVMASRIASGRSLVPRLLM
NGPAPIANPLAIDPNHLATIRNAMYAVVNEGGTGGRARLNIPGASLAAKTGTAQVRRITM
AERGSGVLSNASLPFKLRDHALFVCFAPVENPKYAAGIVLEHGGHTVTNLDTPGIGRDII
TYLLDRDKALASLAELEPTWGGDIATRAAAETAAYKSQISALQAVQTETDATAPTDAPAV
EAATDAANSSAAAIANTALPAEQGSHEADQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcccgccgcgcccgaccaccgcagcggcacaaagctacagtttctctcgccgg
gcgatgatggtcggcggaatacagggcgcggtcgcactcgctctcgccgggcggatgggc
tggctcgcggtcgcggagaacgagcattataagctcttgtcggagagcaaccgcgtcaac
ctgacgatgatcccgccgcggcgcgggtggatcgtcgatcgctacggccatgcgatcgcc
aacaaccgcaccgatttccgcgtcgacatcatccgcgatcggctgcccgagagcgagcag
ccgcgtgtgctcaagctgctccagcaattgctcggcctgccgcccgagcagatcagccgg
atcgagaacgacatcaagcgggcggcggggttccagcccgtgcaggttgccgaaaagctg
actccggacctgttcgcggcggtgcaggtgcggctgcccgaattgcccggtgtggccccc
acggcgggctattcgcgaaactaccctgcggcgcaggcggtggcgcatctgaccggctat
gtcggtgcggcatcggccgagcagtatcaaaagaccaaggacgccttgctgatcaccccc
gggttcaagatcggcaaggacggcctggaacgcgcgctcgaaccgaaactgcgcggcgaa
cccggcgccaagcgagtcgaggtgacggcgcgcggcaagctggtccgcgaactcgaaacg
cgccccgacgtcgccggcaaggtccagcgcctgacgatcgacgcgggcctgcaggaatat
gctgcgcgccgactcggcaccaattcgggctccgcggtggtcatcgatgtgacgagcggc
gacgtcctcgccttcgtgtcgatgccggcctacgaccccaacagcttttccgacggcatc
agtcatctcgaatggaagatgctgtcggacaacgaccacgtgccgttgatgaacaaggtg
ctgcaggggctctatccgcctgggtcgacggtcaagccgatgaacggcctcgcgctgctg
agcaacggcgtcagcgcggaggaaacagtcgtctgcaccggcgcgttgcgcgtcggcagc
ggcatcttccactgccattcccgtcgcgggcacggtgcgctcaacctcaagcgcgcgatc
atggcgagctgcgacatctacttctatgagatggttcggcggctgggatacgatcacgtc
gcgccgaccgcacgcatgctcgggctcgggcagaaattcgacctgccctattcgacgcaa
cgctacggcaccgtccccgacagtgcgtggaagctaaagaagtataagcaggaatggacc
gtccccgattcgctcaatgcgtcgatcgggcaaggttacgtgctggccaatccgctccag
ctcgccgtgatggcgtcgcggatcgcatcggggcgttcgctcgtgccgcgcctgctgatg
aacggccccgcgccgatcgccaatcccctggcgatcgatcccaaccacctcgcgaccatt
cgcaacgcgatgtacgccgtggtcaacgaaggcggcaccggcggtcgcgcgcggctcaac
atccccggtgcttcgctcgcggccaagaccggcaccgcgcaggtccgccgcatcacgatg
gctgaacgcggcagcggcgtgctgagcaacgcgtcgttaccgttcaagctgcgcgaccac
gcgctgttcgtctgcttcgcaccggtcgaaaatccgaaatacgcggccggcatcgtgctg
gaacatggcggccacacggtgaccaacctggatacgccggggatcgggcgcgacatcatt
acctatctgctcgaccgcgataaggcgctggcctcgctcgccgagctcgagccgacctgg
ggtggcgacatcgcgacccgcgccgcggccgagacagcggcgtacaagagccagatttcc
gcgctccaggccgtgcagaccgaaaccgacgcgaccgcgccgaccgatgcccccgcagtc
gaggccgcgaccgatgccgccaattcctccgccgccgcgatcgccaacaccgccctccct
gccgaacagggctctcacgaggccgatcagtga
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