KEGG   Sphingomonas panacisoli: FPZ24_12115
Entry
FPZ24_12115       CDS       T07288                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
spai  Sphingomonas panacisoli
Pathway
spai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:spai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FPZ24_12115 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spai03400]
    FPZ24_12115 (xth)
Enzymes [BR:spai01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     FPZ24_12115 (xth)
DNA repair and recombination proteins [BR:spai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     FPZ24_12115 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: QDZ08130
UniProt: A0A5B8LM13
LinkDB
Position
2409088..2409882
AA seq 264 aa
MIIATYNVNGVNGRLPVLLRWLAERQPDVVCLQELKAPQDKFPEAAIAEAGYEAIWHGQK
SWNGVAILSRIGTPVETRRALPGDPDEAQSRYIEAAVGGVLIGGLYLPNGNPRPGPKFDY
KLRWFDAFARHARELLDADMPVVLAGDYNVMPTDLDVYKPERWRDDALFAPEVRAAYANL
VAQGWTDALRTQHPDETIYTFWDYFRNAYGRNAGLRIDHLLLSPTLAGRLRAAEVDRHVR
NWEKTSDHAPVWIELGEATRRSRR
NT seq 795 nt   +upstreamnt  +downstreamnt
gtgatcatcgccacctataacgtcaacggcgtgaatggccggctccccgtgctgctacgg
tggctcgccgaacggcaaccggacgtggtttgtctgcaggagttgaaagcgccgcaggac
aagttccccgaagccgcgatcgcagaggctggatacgaagcgatctggcacgggcagaaa
agctggaacggcgtggcgatcctcagccggatcgggacacccgtcgaaacccgtcgcgcc
ctgccaggcgatcccgacgaagcgcagagccgctacatcgaggcggcggtcggcggggtg
ctgatcggagggctctatcttcccaatggcaatccgcggccgggccccaagttcgactac
aaattgcgctggttcgacgcattcgcccgtcatgcgcgcgagctgctcgatgcggacatg
ccggttgtgttggcgggggactacaacgtgatgcccaccgacctcgacgtctacaagccg
gagcgctggcgcgacgacgcgctgttcgcgcccgaagttcgcgcggcctacgccaatctc
gtcgcgcagggctggaccgacgcgctgcgcacgcagcatcccgacgaaacgatctacacc
ttctgggattatttccggaacgcctatggccgcaatgccgggctgcggatcgaccatctg
ctgctcagcccgacgctcgccggccgcctgcgcgctgccgaggtcgaccggcacgtgcgg
aactgggagaaaacgagcgatcatgcgccggtgtggatcgagcttggcgaggcgacgcgc
cgttcacgccgctga

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