Sphingomonas panacis: AWL63_03665 Help Entry AWL63_03665       CDS       T04760                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism span  Sphingomonas panacis Pathway span03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:span00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     AWL63_03665  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:span03400]     AWL63_03665 Enzymes [BR:span01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      AWL63_03665 DNA repair and recombination proteins [BR:span03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      AWL63_03665 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S RNA_ligase Motif Other DBs NCBI-ProteinID:  AOH83207 UniProt:  A0A1B3Z726 LinkDB All DBs Position complement(801756..804206) Genome browser AA seq 816 aa AA seqDB search MSETDPLARYNAKRDFAKTAEPAGTLAPGHGNRFIVQKHDATRLHWDFRLEIDGVLKSWA VTRGPSLDPNEKRLAVRTEDHPLSYADFEGTIPAGEYGGGTVMLWDSGTWAPIKGKSAKD LEKGHLHFILDGERMKGEWLLIRLKPRGKEKGENWLLRKIDDAEAGATDALVEGALTSVT TGRTMAEIAEGVKPKGSVRGERKAKPRSGPGLRRGDVGFQPLQLATLVDSVPAGSGWLHE VKYDGYRALVAISGGTAKVFTRSGLDWTDKFAGIAEAAAALDVEDALIDGEIVAFKDGRP DFSTLKDAISSGGDMTFFAFDLLALDGEDLTGLPNIARKERLRPLVSGDDARLQFAEHII GSGEQLFETMCREGFEGVVSKRADAPYRGRRTTAWLKTKCIRRQEFVIVGWLPSDKGRGF RSLLLGLNGADGLVYAGKVGTGFNAALIDSLSAKLARLERKTPTVTAPRAAVRGARWVSP KLVAEVAFAEATPDGVLRHSSFIGLREDKAAKDVVAEVPVAVAEPDATPEIHVTVSSRER LIFPESDVTKGDLADYYAQVSGVMLPWAANRPVSLVRCPQGRGKACFFQKHDAGSFGDHV HQVPIREKDGSTENYLYIDDADGLVACVQMGTIEFHGWGSSVATLEQPDRMVFDLDPDEG LGFDIVRKAAEDLKDHLADIGLTSFAMLSGGKGVHVIVPLTPQAEWPAVKDFADRFSRAL SAAEPERFVATMSKAKRKDRIFIDWLRNQRGATAVLPYVARARAGAPVAAPVSWAELREI DRANRWGVRDVAELIDRARSRALAGWGFADQVLPDL NT seq 2451 nt NT seq  +upstreamnt  +downstreamnt atgagcgagaccgatcccctcgcccgctacaatgccaagcgcgatttcgcgaagaccgcc gagcccgccggcacgctcgcgcccggtcatggcaaccgcttcatcgtccagaagcacgat gcgacccggctgcactgggacttccggctcgaaatcgacggcgtgctcaagagctgggcg gtgacgcgcgggccgagcctcgatccgaacgagaaacggctggcggtgcggaccgaggac catccgctgtcctatgccgatttcgaggggacgattccggcgggcgaatatggcggcggc acggtgatgctgtgggacagcggcacctgggcgccgatcaaaggcaaatcggcgaaggat ctcgagaaggggcatctccacttcatcctcgatggcgagcggatgaagggcgagtggctg ctgatccggctgaagccgaggggcaaggagaagggcgagaactggctgctgcgcaagatc gacgacgccgaggccggggcgaccgatgcgctggtggagggcgcgctgacgagcgtgacg accgggcggacgatggcggagatcgcggaaggggtgaagccgaaggggtcggttcggggt gagcgcaaggccaagccacgcagcggccccggcctgcgccggggcgacgtcgggtttcag ccgctccagcttgccacgcttgtcgattctgtccccgccggatcgggctggctgcatgag gtgaaatacgacggctatcgcgcgctcgtcgccatatcgggcggcacggccaaggtgttc acccgctcggggctcgactggaccgacaagttcgccggcatcgccgaagccgccgccgcg ctcgacgtggaggatgcgctgatcgatggcgagatcgtcgcgttcaaggatgggcggccc gatttctcgacgctcaaggatgcgatttccagcggcggcgacatgaccttcttcgcgttc gacctactcgcgcttgacggtgaggatctcaccgggctgcccaatatcgcgcgcaaggaa cggctgcgtccgctcgtcagcggtgacgatgcgcggctccagttcgccgagcatatcatc ggcagcggcgagcaactgttcgagacgatgtgccgcgaggggttcgagggcgtcgtgtcg aagcgcgccgatgcgccgtatcgcgggcggcggacgaccgcctggctcaagaccaaatgc atccgccggcaggagttcgtcatcgtcggctggctgccgtccgacaaggggcgggggttc cgctcgctgctgctcgggctgaacggcgcggacgggctggtctatgccggcaaggtcggc accggcttcaatgcggcgctgatcgactcgctttcggccaagctcgcccggctggagcgc aagacgccgaccgtcaccgcgccgcgcgcggcggtgcgcggcgcgcgctgggtcagcccc aagctggtcgccgaggtcgcctttgccgaggcgacgcccgacggcgtgctgcggcattcg agcttcatcgggcttcgcgaggacaaggcggcgaaggatgtggtggcggaggtgccggtc gcggtggcggaaccggatgcgacgcccgagatccacgtcaccgtcagcagccgcgagcgg ctgatctttcctgagtcggacgtgaccaagggcgatctcgccgactattacgcgcaggtc tcgggcgtcatgctgccgtgggcggcgaaccgtccggtcagtctggtgcggtgcccgcag gggcgcggcaaggcgtgttttttccagaagcatgacgctggcagcttcggcgatcacgtc catcaggtgccgatccgcgagaaggacggatcgaccgagaattatctctatatcgacgac gccgatggcctcgtcgcgtgcgtgcagatgggcacgatcgagttccacggctggggatcg tcggtggcgacgctcgaacagcccgaccggatggtgttcgatctcgaccccgacgagggg ctgggcttcgatatcgtgcgcaaggcggcggaggatctgaaggaccatctcgccgacatc ggcctcaccagcttcgcgatgctgtcgggcggcaagggcgtgcatgtcatcgtgccgctg acgccgcaggccgagtggccggcggtgaaggatttcgccgatcgcttctcgcgcgcgctc agcgccgccgagccggagcggttcgtcgcgaccatgtccaaggccaagcgcaaggaccgt atcttcatcgactggctgcgcaaccagcgcggcgcgacggccgtgctgccctatgtggcg cgcgcgcgcgccggtgcgccggtggcggcgccggtaagctgggcggaattgcgcgagatc gaccgcgccaatcgctggggcgtgcgcgacgtggcggaactgatcgaccgcgcccgatcg cgcgcgcttgccggctggggcttcgccgatcaggtgctgcccgatctgtga

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