Saccharomyces paradoxus: SPAR_E00830
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Entry
SPAR_E00830 CDS
T08193
Name
(RefSeq) Prp22
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAR_E00830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spao03041
]
SPAR_E00830
Enzymes [BR:
spao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPAR_E00830
Spliceosome [BR:
spao03041
]
Complex C
Other components
Step II factors
SPAR_E00830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
S1
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
PWI
nSTAND3
ABC_tran
AAA_30
AAA_14
AAA_19
SRP54
AAA_7
T2SSE
Acyl-CoA_ox_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
54630068
NCBI-ProteinID:
XP_033765826
UniProt:
A0A8B8UQ85
LinkDB
All DBs
Position
V:176355..179792
Genome browser
AA seq
1145 aa
AA seq
DB search
MSDISKLIGAVVGSDDPVIIEFVLNIINKSANLQEFIQNIQKLDAGISYEDSTKMYDAFS
GKQEKEKIRSTVIDPPLSQKVHQVLKDDVNLDDPVVTEFVLSILNKSKSITEFQGQLNSM
QSGLDNETIFKIYQIASPPVIKEEASVFPSTKIPIKIEEIREETQRIESLDPSPVLHKVY
EGRVRNITSFGCFVQIFGTQMKNCDGLVHISEISEQRTLDPHDVVKQGQHVFVEVIKIQN
NRKISLSMKNVDQHSGETSKTNNESVEDRGRSRDTQTSRKMKNKIKRRALTSPERWEIRQ
LIASGAASIDDYPELKDEIPINTSYLTAKREEGSIINTETENVDSKPKEEQEKNETDEID
VELNTDDGPKFLKDQQVKGAKKYEMPKITKVHRGFMNRSAMNGSNAIRDHREEKLRKKRE
IEQQIRKQQAFDDPTKNRKDSRNEIQTLRNKLVVTEWERNRMNEPISYGKRTSMPISVQR
QTLPVYAMRSELMRAVRENQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVA
AVSVAKRVAEEVGCKVGHDVGYTIRFEDVTSPNTRIKYMTDGMLQREALLDPEMSKYSVI
MLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTF
PVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGD
SIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKI
NIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQR
QNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTKLGKEMSL
FPMDPTLSRSLLSSVDKQCSDEIVTIISMLSVQNVFYRPKDKQLEADNKKAKFHHPYGDH
LTLLNVYTRWKQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKMGLRLISCHSDPDL
VRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVIYHSIVLTSREYM
SQVTSIEPQWLLEVAPHFYKAGDAESQSRKRAKIIPLHNKFAKDQNSWRLSSIRQSRERA
LGIKR
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatatatcgaaactaataggagctgtggtgggatctgatgaccccgtgatcatt
gaatttgtactgaacattataaataagtccgccaatttgcaagagtttatacaaaatatc
caaaaattggatgccggcatatcctacgaggacagtaccaagatgtatgatgcattctca
ggaaagcaggaaaaagaaaaaatacgaagtacagttatagatccaccgttaagtcaaaaa
gttcatcaagtgctgaaagatgacgttaatttggatgaccctgttgtgactgaatttgtt
cttagcattttgaataaatctaaatcaataactgagttccagggacaactgaattcgatg
caaagcggactcgataatgaaacaatcttcaaaatatatcaaattgcatcaccaccagta
ataaaagaagaagcttctgtttttccaagcactaagatcccaattaagatagaagaaatc
cgggaagaaacacaaagaatagaaagtttagaccctagccctgtccttcataaagtttat
gaaggtagagtgagaaacataacttcttttggctgttttgtccaaatttttgggacacag
atgaagaactgcgatggtttagttcatatttcagaaatttcagaacaaagaacattggat
ccacacgatgttgtgaaacaaggccaacacgtatttgtcgaagtgataaaaattcaaaat
aatagaaaaatatcgctctcgatgaaaaatgttgatcaacatagtggagaaaccagcaaa
acaaataatgaaagcgtcgaagatagaggtagatccagggacactcaaacaagcaggaaa
atgaaaaataaaattaaaaggcgcgcattgacttcaccggaaagatgggaaattcggcaa
ctcattgctagtggtgctgcttccattgatgattatcccgaattgaaagatgaaataccc
ataaacacttcctatttgaccgcaaaaagggaagagggtagtatcatcaacactgagaca
gagaacgtggactcaaaaccgaaagaagaacaagaaaaaaatgagacggatgaaattgat
gttgagctaaatacagatgatgggcccaagtttttaaaggatcagcaagtcaagggggcc
aagaaatatgaaatgcctaaaattacgaaagttcacagaggatttatgaatcgttcagca
atgaacggctcaaatgcaataagagatcacagagaagaaaaattaaggaaaaagagagag
attgaacaacaaattaggaagcaacaagcattcgatgatcccacgaagaacagaaaggat
tccaggaacgaaattcaaacgttgagaaataagctggtcgttaccgaatgggaaagaaac
aggatgaatgaacctatctcatacggcaaaagaacttccatgccaatcagtgtacagcgt
caaactttgcctgtatatgcgatgagatcagaattgatgcgcgctgtgcgtgaaaatcaa
tttttggtcattgttggtgagacaggctcgggtaaaaccactcagattactcaatactta
gatgaagaagggtttagtaactatgggatgatcggatgtacccaacctcgtagggttgct
gctgtgtctgttgctaaaagggtagctgaagaagttggctgcaaagttggccatgacgtt
ggttatactattaggttcgaagatgtcactagcccgaataccagaataaaatatatgact
gatggtatgttacaaagagaggcgttgttagatcctgagatgtcaaaatattctgttatc
atgttagatgaggctcacgaaagaaccgtggcaactgatgttttatttgcattgttgaag
aaagcggccattaaaaggccagagttaaaagtaatagtcacatccgccactttgaactct
gctaaattttctgaatatttcttaaattgtccaattattaatatacctggtaagacgttt
cccgtggaggtgctctactcacagacgccccaaatggattatatagaggcagctttggat
tgtgtaatcgacatccatattaatgaagggccaggtgatattttagtctttctgaccgga
caggaagaaatagactcatgctgtgaaattttatatgatagggtaaaaactttgggtgat
agcattggcgaattactgattttacctgtttattctgctttaccaagtgaaatccaatcg
aaaatttttgaacccactccaaagggcagtagaaaagttgtatttgctacaaatattgca
gaaacttccatcactattgatggcatttattatgtcgtagaccctggatttgcaaaaatc
aacatttataatgctagagcaggtatcgagcagttgatagtgtctccaatctctcaagca
caggcaaatcaaagaaaaggtagggcggggagaacaggtcctgggaaatgctatcgactc
tatacagaatccgcattttacaatgaaatgttagaaaacacggttccagaaattcaaaga
caaaatctttctcatactattttaatgctaaaggccatgggaattaatgatttattgaaa
tttgacttcatggacccaccgcccaaaaatttaatgcttaacgcgctgacagaattatac
cacttacaatcactggatgacgagggaaaattaacaaaactaggtaaagagatgtcattg
tttccaatggatcccactctatcacgctccttattatcatctgttgataaacagtgttcc
gatgaaattgttactataatttcaatgttgtcagtacagaacgttttctatcgtccgaaa
gataagcaattggaagccgataacaagaaggcaaagttccatcacccatatggtgaccat
ttaacattattgaacgtttacactagatggaaacaggcaaattactcagaacagtattgc
aaaacaaactttttgcactttaggcatttgaaaagagccagagatgttaaaagccaaatc
agcatgatatttaagaaaatgggactaaggttgataagctgtcatagtgatcctgattta
gttcgtaaaacatttgtatcggggttcttcatgaatgctgcaaagcgagactcacaggtg
ggttataaaaccatcaatggtggtacagaggttgggatacatccttcgagttcattgtac
ggaaaagagtatgaatacgtgatataccatagtattgtactaactagccgggaatacatg
tcacaggtaacaagcattgagccccaatggctcctggaagtagcacctcatttttataaa
gctggagatgctgaaagtcaatctaggaagagagcaaaaatcattccattgcataataaa
tttgccaaggatcaaaattcatggagactgagctcaataagacagtcaagggaaagggca
ttaggtatcaagagataa
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