Saccharomyces paradoxus: SPAR_I00550
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Entry
SPAR_I00550 CDS
T08193
Name
(RefSeq) Nup159
KO
K18715
nucleoporin NUP159
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_I00550
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPAR_I00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP214
Motif
Other DBs
NCBI-GeneID:
54631259
NCBI-ProteinID:
XP_033766940
UniProt:
A0A8B8UT28
LinkDB
All DBs
Position
IX:complement(138237..142829)
Genome browser
AA seq
1530 aa
AA seq
DB search
MSSLNDEVPTETSEDFGFKFLGQKRILPSFNEKLPFASLQNLDISNRKSLFVAASGSKAV
VGELQLLREHITSDSSPLTFKWEKEISDVIFVCFHGDQVLVSTKDALHSLNLEEFSEFQT
VISFESPVFQLKNVNNTLIILNSNNDLTALDLRTKLTKQLAQNVASFDVANSQLIVLLKD
RSFQSFTWRNDTLDKQFEFSLPSELEEVSVEEYSPLSITILSSQIFLVVFGNTVSETSDE
PSYDQKMYIIKYVDGNASFQETFDIIPPFGQIVRFPYVYKVTLSGLIKPGVNVNVLASSC
SSEVSIWDSEQVIEPSQDAERAVLPISEETDRDTNPVGVAVDVVTSGTIIEPCSGVDTIE
RLPLIYILNNEGSLQIVGLFHVAAIKSGHYSINVDSLENDKSSSPTSKNIAVAGQEQKEK
KKEQEREEKEENNEISKSSSANPFISANTSGFTFLKKQPATINSLQSQSSSTFGAPSFGS
SAFSFDLSSAPSANSGVVSTEQSTAGSTFAKPAFGKPAFGGVAEESSTSSSAFGKPSFGT
PSFGSGNASAEPSASGSAFGKPSFGTPSFGSGNASAEPSTSGSAFGKPSFGTSSFGSGNA
SAEPSTSGSAFGKPSFGTPSFGSGNASAEPSTSGSAFGKPSFGTSSFGSGNASAEPSTSG
SAFGKPSFGTSAFGTTSNDATNPGSVFGKAAFGSSSFAPATNGPFGSSSTTSKPEFGSPE
QMDSISPFPSSDNQSEDESKSDAESSSTPFGANSNTSNKSNTNAFDFGSSSFGSNFSKAL
NSVDSDASFKFGTHASPFSSQLETKSPFSSLTKDNTGNGSLDKDSTNEINDDDEHESNSP
SVSNNDLSDSTVEQTPSTRLPEASSNEDSAIFGEERPKSSIGKLTETIKKSANIDMASLK
NPVFGNHVKAKSESPFSAFATNINKPSSTTPAFSFGNSTINKSNTFTAAHSSERVSFSPT
EETGNKEASGPGPMTLKDEENPFLPRKEEISGRSPEKDHNQEAKDAVHISGNEKPVNTPE
QVCGNTKQEQIPAAQDVYFHERSETNSKYGQHVMDDHDNKPKDISGTSENDERTDQRRKG
VQGDGLLLKKDNEKEDFDSDMATKEFKDHQSVEEVVSEKDSRQSGEAEESDDNTSLNSDQ
DESISESYDKLEDINTDELPHSGETFKVNDVGTSADFDVQTSLEDNYAESGIQTDLSESS
KENEVQTDAIPVRHHSTQTVEKETVDNGLQTDPVETCNFSVQTFEGDENYLAEQCKPKKM
KEYYIGAKISSIPLVSQDSTLRLIESTFQTVEAEFTVLKENIQNMDTFFTDQSNIPLMTR
TVQSLNNLYTWRIPEAEILLNIQNNIKSEQTQITNARIQDLEEKVLNYVKRDVAEMTEDI
VNAKEEYLFLRHFNDSSSGYIKDLSTHQFRMQKALRQKLFNVSAKINHTEELLNILKMFS
VKNKRLDENPLVAKLAKESLARDGLLEEIKLLREEVSRLQLEEKGKETSTLDTSSSITKD
MKGFKIVEVGLAMNTKKQIGDFFKNLNLAK
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttgaatgatgaagtacccactgagacttcggaagacttcggtttcaagttt
ttgggtcaaaaacgaattctaccttcattcaacgaaaaattgccatttgcatctcttcaa
aacctcgatatctcaaacagaaaatctttattcgttgctgcctctggtagcaaagcggtg
gtcggtgaacttcaattgttaagagaacatatcacctccgactcttccccgttaacgttt
aagtgggagaaagaaatctcagatgtaatatttgtatgttttcatggcgatcaggttttg
gtttcaaccaaagatgcattacattcattaaatctggaggaatttagtgaatttcaaaca
gtaatttcttttgaaagtccagttttccaattgaagaacgttaataacactttaataatt
ttaaattcgaataacgatttaacggcactggatttaagaacaaaattaactaagcagctg
gcgcaaaatgttgcctcttttgatgtcgcaaattcacaattgatcgttctactaaaggat
agaagttttcaaagtttcacttggcgaaatgacaccctggacaaacaatttgaattctct
ttaccatcggaattggaagaggtttcagtagaagaatattctcctttgagtattactatc
ctatcttcgcagatttttttggtagtgttcggtaacaccgtttcagaaaccagtgacgaa
ccttcgtacgatcaaaaaatgtacattataaagtacgtggatggcaacgcctcatttcaa
gaaacttttgatattatacctccatttgggcaaatagtaagatttccatatgtgtacaaa
gttaccttatcaggtttgattaaacctggtgtgaatgtaaatgtgctagcatcatcatgt
tcaagtgaggtaagcatatgggattcagaacaagttattgaaccttctcaggatgctgaa
cgagcagtattacctatcagcgaggagacagatagggacacaaatccagtaggtgtggca
gttgatgttgtcacttcaggcactattatagaaccttgttctggtgttgatacgatagaa
cgattaccgctgatttacatattgaataacgaaggtagtttacagatagtgggattgttt
catgtggcagcaattaaaagcggtcactatagcataaacgtggactctctagaaaatgac
aagtcttcctctcctacatcaaaaaatattgctgttgctgggcaggagcagaaagaaaaa
aagaaggagcaagaaagagaggaaaaagaagaaaataatgaaataagcaagtcttcatcg
gctaatccttttatatcagcaaatacatcgggcttcacctttctcaaaaaacaaccagcg
actattaatagtttgcaatctcaaagttcttcaacctttggtgctccctcatttggatca
tccgcattttcatttgatttgtcatcggctccatctgccaattccggtgtagtgtccact
gaacaaagcaccgcaggttctacttttgccaagccagcattcggtaaacctgcgttcgga
ggggttgccgaagaatcatctacatccagttcagcctttggtaagccttctttcggtaca
ccttcctttggttctggaaatgcgtctgctgaaccatcagcctctggttcagcctttggt
aagccttctttcggtacaccttcctttggttctggaaatgcgtctgctgaaccatctacc
tctggttcagcctttggtaagccgtctttcggtacatcttcctttggttctggaaatgcg
tctgctgaaccatctacctctggttcagcctttggtaagccttctttcggtacaccttcc
tttggttctggaaatgcgtctgctgaaccatctacctctggttcagcctttggtaagccg
tctttcggtacatcttcctttggttctggaaatgcgtctgctgaaccatctacctccggt
tctgcctttggtaagccttcatttggtacgtctgcattcggaactacttcaaatgacgca
actaaccctggatctgtatttggaaaggctgcatttggttcatcatcttttgcacctgcc
accaacggacccttcggatcaagttctacgacttcaaaaccagaatttggcagtccagag
cagatggattcaatttcgccgttcccatcatctgacaatcagagtgaagatgagtctaag
agtgatgcagagtcttcttcgacaccttttggtgcgaactctaacacttctaataaatca
aataccaatgcctttgattttggaagctcttcctttggatccaatttttcaaaggctcta
aactcagttgattctgatgcctcgtttaaatttggtactcacgcttcacctttttcttct
caattagaaactaaatcaccctttagctctcttacaaaagataatactgggaacggatct
ttggataaagactccaccaacgaaatcaacgatgatgacgaacacgaaagtaatagtcca
agcgtaagcaataatgatttgtcagattctacggttgaacaaacaccttccactagatta
ccagaggcttcctcgaatgaagatagtgcaattttcggggaagaaaggccaaaatcttct
attggcaagctaactgaaactataaaaaaaagcgccaatattgacatggctagtttgaaa
aatcctgtgtttggaaatcatgttaaagcaaaatccgaatcgccgttctcagcatttgca
acaaatattaataaaccaagttctactacacctgctttttcgtttggaaactctacaata
aacaagagcaacacatttacggctgcgcattcttcagagagagtatcgttttcaccaaca
gaagaaactggcaataaggaagctagtggaccaggccccatgaccttgaaggatgaggag
aacccctttttgccaaggaaagaagaaatcagcgggagaagtcctgaaaaggatcataac
caagaagcaaaagatgctgttcatatatcaggaaatgaaaaacctgtaaacacccctgaa
caagtatgtggtaataccaagcaagaacaaattccagcagcacaggacgtttactttcat
gaaagaagcgaaacaaactcaaaatatggccagcatgttatggatgatcacgacaacaaa
cccaaggatataagcggaacttctgagaatgatgaaaggaccgatcaacgaaggaaaggt
gtccaaggggatggattgctattgaaaaaagacaacgaaaaagaagattttgactcagat
atggcaacaaaggaatttaaggatcatcaatctgtagaagaggttgtgagtgaaaaggac
agtagacaaagcggtgaagctgaagaatctgatgataacacgtcgctgaatagtgaccag
gatgaaagtatatctgaatcttacgataagttagaagatatcaataccgatgagctgcct
catagtggagaaacttttaaagtaaatgatgtgggcacttccgctgattttgatgtgcaa
acttcattggaagacaattatgccgaatctggtatacaaacagatctttcggaaagttcc
aaagaaaatgaagttcaaacagatgccatacctgtgagacaccacagtacacaaactgtt
gaaaaggaaacggtcgacaatggtcttcaaacagaccctgtcgaaacatgcaatttttcc
gttcaaacctttgagggtgatgagaactatttagccgagcagtgtaaaccaaaaaaaatg
aaagaatattacattggtgcaaaaatatccagtattcctttagtttcacaagattctact
ctacggttgattgaaagtacattccagacggtcgaagctgaatttactgtcctgaaggaa
aatatccagaatatggatactttttttactgatcaatcaaatatacctttgatgacacgt
acagttcagtctctcaacaacttgtacacttggaggataccagaggccgaaattctatta
aatattcaaaataatatcaagtcggaacaaacgcaaataacaaatgctcgtattcaagac
ctggaggaaaaagttttaaattatgttaagagagatgttgcagagatgactgaagatata
gtcaatgcaaaggaggaatacctatttttaagacattttaacgactcttcgagtggatac
attaaagatctcagcacgcatcaatttagaatgcaaaaggcattacgtcaaaagctattc
aatgtgtctgccaaaattaatcatactgaagagttgctaaatattttgaaaatgttctct
gtaaaaaataagagattggacgaaaatccattagtggcgaaactagccaaagaatctctt
gcacgtgacggattgttggaggaaattaagttattgcgtgaggaagtgagtaggttacaa
ttggaggagaaaggaaaagagacttcgacattggatacatcttcttcaataacaaaggac
atgaaaggatttaaaatagtagaagttgggttagctatgaatacgaagaaacaaattggt
gacttcttcaaaaatttgaacttggcaaaatag
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integrated database retrieval system