Saccharomyces paradoxus: SPAR_I00850
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Entry
SPAR_I00850 CDS
T08193
Name
(RefSeq) Air1
KO
K12597
protein AIR1/2
Organism
spao
Saccharomyces paradoxus
Pathway
spao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPAR_I00850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_I00850
03016 Transfer RNA biogenesis [BR:
spao03016
]
SPAR_I00850
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
SPAR_I00850
Transfer RNA biogenesis [BR:
spao03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
SPAR_I00850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIR2-like_ZnK4
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
54631289
NCBI-ProteinID:
XP_033766970
UniProt:
A0A8B8UT61
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All DBs
Position
IX:complement(205780..206862)
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AA seq
360 aa
AA seq
DB search
MSTLLSEVESMDSLPFVKDTTPTGGDSSSFNKLLAPSIEDVDANPEELRTLRGQGRYFGI
KDYDSNGAIMEAEPKCNNCSQRGHLKRNCPHVICTYCGFMDDHYSQHCPKAIICSNCNAN
GHYKSQCPHKWKKVFCTLCNSKRHSRERCPSIWRSYLLKTKSANNGDFDFQTVFCYNCGN
GGHFGDDCAERRSSRVPNTDGSAFCGDNLAVKFKQHYFNQLKDYKRATSEGQNFDSEQEF
NLFDYEYNDDAYDLPGSRNYRDKMKWKNKMQSTRNKNSNNNSYENSNNRKRKSPFSPQSY
KVTKNKKVQAHPLDFPRNTQNSRTSDYSSRSNYNRQDFPRGPKNKRGPPSFNKAQRNGRY
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacattgttatctgaggtggaaagtatggatagcttgccgtttgtgaaggacaca
acaccgacaggaggcgactcgtcatcgtttaataaattattggctccgtccatagaggac
gtagatgctaacccagaggaactgagaactttgcgtggccaaggacggtattttggaata
aaagattatgactcaaatggtgcaataatggaggcggagccaaaatgtaataattgctcg
caaagagggcatttgaaaagaaattgtccccatgtgatatgtacttactgtgggtttatg
gatgatcattactcacagcactgccccaaggctattatctgttctaattgtaatgcaaac
ggccattataaatcgcagtgtcctcacaaatggaagaaggtgttctgcacgctttgcaat
agtaagagacactcgagagaaagatgtcctagtatttggagatcttatttgttaaaaact
aaaagtgccaacaatggtgactttgactttcaaactgttttctgttataactgtgggaac
ggcggtcattttggtgatgactgtgccgaaagaaggtcatccagagtgccgaacactgat
ggaagtgcattttgcggtgacaacctggccgtaaaattcaaacagcactattttaatcaa
ttgaaggactataaacgcgcaacttctgaagggcaaaactttgatagcgaacaagaattc
aatttgtttgattacgaatataacgacgatgcatacgatctccccggttcaagaaattat
agagataaaatgaaatggaagaacaaaatgcaatctacaaggaacaaaaatagtaacaac
aatagttatgaaaacagtaataacaggaagaggaagtctccattcagcccacagagctac
aaagtaacgaaaaataaaaaagttcaggcgcatcctttagattttcccagaaacacccaa
aacagcagaacaagtgattattcaagccggtctaactacaataggcaggactttcccagg
ggacctaagaacaagaggggcccaccctcttttaacaaagcgcagagaaacgggcgttat
tga
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