Saccharomyces paradoxus: SPAR_L02530
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Entry
SPAR_L02530 CDS
T08193
Name
(RefSeq) Utp13
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
spao
Saccharomyces paradoxus
Pathway
spao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAR_L02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_L02530
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPAR_L02530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp13
ANAPC4_WD40
NBCH_WD40
WD40_like
Ge1_WD40
CPSF_A
PorB
Hira
Motif
Other DBs
NCBI-GeneID:
54632346
NCBI-ProteinID:
XP_033767977
UniProt:
A0A8B8UW32
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Position
XII:complement(550566..553019)
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AA seq
817 aa
AA seq
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MDLKISYKGVSLNPIYAGSSAVATVSENGRILATPVLDEINIIDLTPGSRKILHKISNED
EQEITALKLTPDGQYLTYVSQAQLLKIFQLKTGKVVRSMKISSPSYILDADSTSTLLAVG
GTDGSIIVVDIENGYITHSFKGHGGTISSLKFYGQLNSKTWLLASGDTNGMVKVWDLVKR
KCLHTLQEHSSAVRGLDIIEVPDSDGPSLQLLSGGRDDIINLWDFDMKKKYKLAKTLPVN
QQVESCGFLKNRDGKRIIYTAGGDAIFQLIDSESGTVLKRTNKPIEELFIIGVLPIMNNS
QMFLVMSDQTLQLINVEEDLENDDGIIQVTSSIAGNHGIIADMRYVGPELNKLALATNSP
SLRIIPIPDLTEAEASLPLDVEIYEGHEDLLNSLDATEDGLWIATASKDNTAIVWRYNEN
SSKFDIYAKYIGHSGAVTAVGLPNIMPKGYPEFLLTASNDLTIKKWVIPKPTVTKSVQII
KVSEYTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVS
FCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIK
IWDCSSGECLKTLDGHNNRLWALSTMNDGDMIVSADADGVFQFWKDCTEQEKEQEQEKAK
LQVEQEQSLQNYMSQGDWTNAFLLAMTLDHPMRLFNVLKRALGESRSRQDIEEGKSGVIF
NEELDEAISTLNDEQLTLLMKRCRDWNTNAKTHTIAQRTIRCILMHHNIAKLSEIPGMVK
IVDAIIPYTQRHFTRVDNLVEQSYILDYALVEMDKLF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaatctcatataaaggtgtatcattaaatcctatctatgcgggaagcagt
gctgttgccactgtctcagaaaatggtagaatactagctactccagtgcttgatgaaatc
aacataattgatctaacaccaggttcaagaaagattttacacaagatctctaacgaagat
gagcaggaaataaccgcgttgaaactaactcccgatggacaatatctcacatacgtttcg
caagcccaacttttaaagatctttcaactaaagaccggaaaagttgtcagatcaatgaag
atttcctccccatcatacattcttgacgcagattcaacttcgactcttctggcagtcggc
ggaacagatggtagtataattgttgtggatatcgaaaatggttacattactcattcgttc
aaaggtcatggtggtacgatttccagcttgaaattttatggacaattgaatagtaaaaca
tggttattagcgtccggtgacacgaatggtatggtaaaagtatgggatcttgttaaaagg
aaatgcttacacacattacaagagcactcttctgccgtgagagggttggatataatcgag
gtaccagatagcgatggaccaagcctgcaattactttccggtggtagagatgatattatt
aatctctgggattttgatatgaagaagaaatataaattggcgaaaacccttccagtaaac
caacaggtagagtcatgcggattcttgaagaaccgtgacggtaaacgcataatttataca
gccggtggtgatgcaatctttcaattaattgactctgaatccggtactgtgctcaaaagg
accaacaaacctatagaagagttattcattattggtgttcttccaataatgaacaattca
cagatgttcttggtaatgtctgatcaaactttgcaactaattaacgttgaagaagatttg
gagaatgatgacggcataatacaggtcacttcgagcattgctggtaaccatggtatcatt
gctgacatgagatatgttggcccagagctaaacaaattggcattggccaccaattctcca
tcgctaagaataatacccatccccgatttaacagaggccgaggcttcgctgcctttggat
gttgaaatttatgaaggtcatgaagatttgctaaactcattagacgctactgaagatggg
ctatggattgcaaccgcctctaaagataatacggctattgtttggagatataatgaaaac
agcagtaagtttgacatttatgctaagtatattggacattcaggcgcagtaacagcagtt
ggattgccaaatataatgccaaagggatatcctgaatttttattgacagcatcaaatgat
ttaaccattaaaaaatgggtaattccaaagccaactgttactaagagtgttcaaattatc
aaggtatccgaatatactcgtcatgctcatgaaaaagacatcaatgctttgtcagtctct
cccaacgattctatttttgcaacagcgtcatatgataaaacttgtaagatctggaacctc
gaaaatggtgaattggaagccacgttggccaaccacaagcgtggactatgggatgtgtcg
ttttgccaatatgacaaattattggcaacatcttcaggtgataagaccgtcaaaatatgg
tcattggatactttcagcgttatgaagacgttggaaggtcataccaacgcggttcaaaga
tgttcctttattaataagcaaaaacaattgataagttgcggtgcagatggcctgatcaaa
atatgggattgctctagcggtgaatgtctgaagactttggatggtcataataataggctg
tgggctttaagtacaatgaatgatggtgatatgatcgtgagcgctgatgcagatggtgtt
tttcagttttggaaagattgtaccgaacaagaaaaagaacaagaacaagaaaaggctaag
ttacaggtcgaacaagaacaatcgcttcaaaattatatgagccaaggtgattggacaaat
gcatttttattagcaatgactttagatcacccaatgaggttatttaatgttttaaagaga
gctctgggtgagtcaagatctaggcaagatatcgaagaaggcaagagtggagtcattttc
aatgaagaattggatgaagccatttctactctaaatgacgaacaattaacgttgttaatg
aaaagatgcagagattggaatacaaatgccaaaacacacactatagcgcaaagaactata
agatgcattttgatgcatcataacatagcaaaattaagtgaaataccggggatggtaaag
atagtcgatgcgataattccatacacacaaagacatttcacaagggtggataatttagtt
gaacaaagttacatattagattacgcattggtggagatggacaagcttttttag
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