Stenotrophomonas pavanii: STNY_R16560
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Entry
STNY_R16560 CDS
T07567
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00020
Citrate cycle (TCA cycle)
spaq00190
Oxidative phosphorylation
spaq00650
Butanoate metabolism
spaq01100
Metabolic pathways
spaq01110
Biosynthesis of secondary metabolites
spaq01120
Microbial metabolism in diverse environments
spaq01200
Carbon metabolism
Module
spaq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spaq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spaq_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
STNY_R16560
00650 Butanoate metabolism
STNY_R16560
09102 Energy metabolism
00190 Oxidative phosphorylation
STNY_R16560
Enzymes [BR:
spaq01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
STNY_R16560
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Thi4
DAO
Pyr_redox_2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
BCX43458
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Position
1787307..1789097
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AA seq
596 aa
AA seq
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MSAYKITEHKYDMVVVGAGGAGLRATFGLAAKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFFDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTAEGKIYQR
PFGGMTTKYGEGPAAQRTCAAADRTGHAMLHTLYQQSLKHDARFMIEYFALDLIFDEEGA
CRGVLALDMSDGTLHLFRAQGVVLATGGYGRAYFSATSAHTCTGDGGGLAMRAGIAMQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSSGERFMERYAPHYKDLASRDVVSRSMTIE
IREGRGVGEHKDHILLDLTHLGPGVIDEKLPGIAESARIFAGVDVHKQPIPVIPTVHYNM
GGIPTNYHGEVVQKVGDNDNAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETIKPGASHKPLPADACDKALGLLDKLRHANGDTPTSVIRDRMQRTMQADAAVFRTS
QTLKEGCEKMDKIFDSFQDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHAHEDYPDRDDVNWQKHTLVSVDEKGKCSFDYRPVHMYTLTDDVSVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacaagatcaccgaacacaagtacgacatggtcgtggtcggcgccggcggt
gccggcctgcgcgccacgttcggcctggccgccaagggcctgcagaccgtgtgcctgacc
aaggtcttcccgacccgttcgcacaccgttgccgcccagggcggtatttcggccgcactc
ggcaacatgggcgaggacgactggcgctaccacttcttcgacaccatcaaggggtcggac
tggctgggcgaccaggacgccatcgagtacatgtgccgtgaggccatcccggccatcatc
gaactcgaacattacggcgtgccgttctcgcgcactgccgaaggcaagatctaccagcgc
ccgttcggtggcatgaccaccaagtacggcgaaggcccggcggcgcagcgtacctgcgcg
gcggccgatcgtaccggccacgcgatgctgcacacgctgtaccagcagtcgctgaagcac
gacgcgcgcttcatgatcgagtacttcgcgctcgacctgatcttcgacgaggaaggcgcc
tgccgcggcgtgctggccctggacatgtccgacggcaccctgcacctgttccgcgcccag
ggcgtggtgctggccaccggtggttacggccgtgcgtacttcagcgccacctccgcgcac
acctgcaccggcgacggtggcggcctggccatgcgtgccggcatcgccatgcaggacatg
gagttcgtgcagttccacccgaccggcatctacggcgccggctgcctgatcaccgagggt
gtccgcggtgaaggcggcatcctgcgcaacagcagcggcgagcgcttcatggagcgctac
gcaccgcattacaaggacctggcgtcgcgcgacgtggtcagccgttcgatgaccatcgag
atccgcgaaggccgcggcgtcggcgagcacaaggaccacatcctgctcgacctgacccac
ctgggcccgggcgtgatcgacgagaagctgccgggcattgccgaaagcgcccgcatcttc
gccggcgtcgacgtgcacaagcagccgatcccggtgatcccgaccgtgcactacaacatg
ggcggcatcccgaccaactaccacggtgaagtggtgcagaaggtcggtgacaacgacaac
gcggtcgtgccgggcctgtacgccatcggcgaagcggcctgcgtgtccgtgcacggtgcc
aaccgcctgggctcgaactcgctgctggacctggtggtgttcgggcgtgcggtggccaac
cgctgcgccgagaccatcaagccgggcgcatcgcacaagccgctgccggccgatgcctgc
gacaaggcgctgggcctgctggacaagctgcgccacgccaacggcgataccccgacctcg
gtcatccgcgatcgcatgcagcgcaccatgcaggccgacgcggcggtcttccgcaccagc
cagacgctgaaggaaggctgcgagaagatggacaagatcttcgactcgttccaggacgtg
aaggtctccgaccgttcgctggtgtggaattcggacctgatcgagacctacgagctgaac
aacctgctgctcaacgcggtggcgacgatcaactcggccgaacagcgcaaggaaagccgt
ggtgcgcatgcgcacgaggactatccggaccgcgacgacgtcaactggcagaagcacacc
ctggtcagcgtcgacgagaagggcaagtgcagcttcgactaccgtccggtgcacatgtac
acgttgaccgacgacgtgtccgtggtgccgccgaagccgcgcgtgtactga
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