Stenotrophomonas pavanii: STNY_R30260
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Entry
STNY_R30260 CDS
T07567
Name
(GenBank) LysR family transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spaq03000
]
STNY_R30260
Transcription factors [BR:
spaq03000
]
Prokaryotic type
Helix-turn-helix
LysR family
STNY_R30260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
BCX44810
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Position
3259259..3260146
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AA seq
295 aa
AA seq
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MSRSLLPPLNALRAFEATARLGGVGRAAQDLHVTHGAVSRQLKLLEDHLGLALFQRAGRG
LRLTAAGTRLQAACSDAFGGIEDCVRELRRPAAAPALVLGCSGSVLARWMIPRLPALQAA
LPGVRLQWSALDGSFTEAQAALDAVLLLAQGPWPRGWQVRELAPERVGVVVAPSHPAAQR
LRHVPPSALLQETLLHTSSRPQAWPAWAQAQGLDVSKLQLGTAFEHLYYLLEAAVAGLGP
AIAPEPLVAEDLAAGRLIAPWGFAATGGFWVLARPDGPADARVDAVADWVAAQLR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccctgctgccaccgctcaatgcgctgcgcgcgttcgaggccaccgcccgt
ctcggcggcgttggccgcgccgcgcaggacctgcatgtcacccacggcgcggtcagccgg
cagctgaaactgctggaagaccacctcggcctggcactgttccagcgcgccggtcgtggc
ctgcgcctgaccgctgcgggcacgcgcctgcaggcagcgtgcagcgatgcgttcggcggc
atcgaagactgcgtgcgggaactgcggcgaccggcggcggccccggcgctggtgctgggc
tgcagtggcagcgtgctggcccgctggatgatcccgcgcctgcccgcgctgcaggccgcc
ctgcccggcgtgcgcctgcagtggtcggcactggatggcagcttcaccgaggcgcaggca
gcgctggatgcggtgctgctgctggcccaggggccgtggccgcgcggttggcaggtgcgt
gagctggcgccggaacgggttggcgtggtggtggcgccatcgcatccggccgcgcagcgc
ctgcgacatgtaccgccctcggcactgctgcaggagacgctgctgcacaccagctcacga
ccgcaggcgtggccagcgtgggcgcaggcacagggtctggacgtgtcgaagctgcagctg
ggtactgccttcgagcacctgtactaccttctggaggcggccgtggccgggctgggcccg
gcgatcgcgccagagccgctggtggccgaggacctcgctgcgggacggctgatcgccccg
tggggatttgcggccaccggtggcttctgggtgctggcacggccggatggccctgccgat
gcgcgcgtggacgcggtggccgattgggtggccgcgcaactgcgctga
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