Saprolegnia parasitica: SPRG_01223
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Entry
SPRG_01223 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
spar
Saprolegnia parasitica
Pathway
spar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPRG_01223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_01223
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
Pre-60S particles
GTPases
SPRG_01223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_III
EFG_IV
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
24123824
NCBI-ProteinID:
XP_012194838
UniProt:
A0A067CXF0
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MSTGRVGTAQLASLQGDSAHIRNICIIAHVDHGKTTLSDSLVSSNGIISDRLAGKIRYLD
NTEEEQLRGITMKSSAISLLYEGPLTPAEKAQRGGSDDDTVPYLINLVDSPGHVDFRVCA
QTHAVLRQAWQEGIRPCLVLNKLDRLIYELQFTPLEAYQHICRIVEQANVIISSMIRADL
LDEQSEMDMSDLVDDDGDETEARERRWMFSPARGNVLFASAYDGWAVGIGYFAAYYAKKF
EMPQGPWRQGLWGEFYFHGKTKKIRSTPWTSNSQPMFVTFVLEPLWAVYKAMEEPTEHNP
DALPPLRQLTKNLRVAKVVSDRELLQKDRRLALQCVMRKWLPLATSVLKMVTRMLPSPVT
AQKSRAEHLCVVNPAFPDQLRTLNAIQACAVDDDAPVVVYICKMLSVEATNLSDYATNAT
LRAMYPIKEVGPSINVSDNRGAEAYVAVARVFSGTFRPNAPMFVLGPKYNGEGIGSSHVT
ALPPMALGLYMVMGSDFVRVEHVAAGNIVGILGLHEHVLKTATLSSTLACPSLARMPYQA
KPIVRVAVEPADPRHFAELEAGLQRLYRSDPTVEVHVQETGEHVIVALGELHLERCVKDL
TERFAKVPLHVSEPLVGFRETIVANETGGTALLSTIFKDLKLAEMTTSTTADGKHKTLVC
PTPDGQVAVHLRAVPLPPAVVDVLEAHAEDWKRFHSTDDDADVATYVRHSSHDKLRARRL
RTEVRTELQAVLAACDDAFWKTMDLDRLWSCGPRRVGPNLLINNVPDWSSPSTIWVLNRG
LVTDERMKLESSLVSGFQLATAAGPLCDEPVWGVAFVVDDIVLTPVDADAEAVYGPLSGQ
VISSIKSGCRSAFLHAPVRLVEAMYKCTVQCQSEQLGKLYSVFAKRRARVVGEELADGSA
LFSVEAYLPVVESFGFATELLKNTSGNASNPQLLFDHWAVMPDDPFFQPTTDEEREDFGE
AIAEHNAVRKLLEGVRKRKGLSREEKIVVHAEKQRTLGRNK
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgggcgcgttggcacggcgcagctcgcgagcctccagggcgactcggcgcac
atccgcaacatctgcatcattgcgcacgtcgaccacggcaagacgacgctcagcgacagc
ctcgtctcctccaacgggatcatctcggaccgcttggccggcaagattcggtacctcgac
aacacggaagaagagcagctccgcgggatcacgatgaagtcgagcgcgatctcgctgctg
tacgaaggcccgttgacgccggccgagaaagcccagcgcggtggctcggacgacgacacg
gtcccgtacctgatcaacctcgtcgactcgccgggccacgtcgactttcgcgtctgcgcc
cagacccacgccgtcctgcggcaggcgtggcaagaaggcatccgtccgtgcctcgtcctc
aacaagctcgaccgcctcatttacgagctccagtttacgccgctcgaagcgtaccagcac
atttgccgcatcgtcgagcaagccaacgtgatcattagctccatgatccgcgccgacctc
ctcgacgagcaaagcgagatggacatgagcgacctcgtcgacgacgacggcgacgagacc
gaagcccgcgagcgccgctggatgttttcgccggcgcgcggcaacgtgctctttgcgagc
gcgtacgacgggtgggccgttggcatcgggtactttgccgcgtactacgccaagaaattc
gagatgccgcaagggccgtggcgccaaggcctctggggcgagttctactttcacggcaag
accaagaagatccggtcgacgccgtggacgtccaacagccagcccatgtttgtgaccttc
gtgctcgagccgctctgggccgtctacaaggccatggaagagccgaccgagcacaacccg
gacgcactcccgccattgcgccagctcaccaagaacctccgcgtggccaaggtcgtgagc
gaccgcgagctgctgcagaaggaccggcgcctcgcgctgcagtgcgtcatgcgcaagtgg
ctgccgctggcgacgtccgtgctcaagatggtgacgcgcatgctgccgtcgcccgtgacg
gcgcaaaagagccgcgccgagcacctctgcgtcgtgaacccggcgttcccggaccagctc
cggaccttgaacgcgattcaagcgtgcgccgtcgacgatgacgcgccggtcgtcgtgtac
atttgcaagatgctctcggtcgaggcgaccaacctctcggactatgcgaccaacgcgacg
ctccgggccatgtacccgatcaaggaggtcggtccaagtatcaatgtatcagacaaccgc
ggcgccgaggcgtatgtcgccgtcgcgcgcgtcttctcgggaacgttccgtccgaatgcg
cccatgtttgtgctcgggcccaagtacaacggcgagggcattggcagcagccacgtgacg
gcgctgccgcccatggcgctcggcctctacatggtcatgggcagcgactttgtccgcgtc
gagcacgtggccgccggcaacattgtgggcatcctcggcctccacgagcacgtgctcaag
acagcaacgctctcgagcacgctcgcgtgtccgtccctcgcgcgcatgccgtaccaggcc
aagccgatcgtgcgcgtggcggtcgagcccgcggacccgcgccactttgccgagctcgaa
gcaggtctgcagcgcctctaccgctccgacccgacggtcgaagtccacgtccaggagacg
ggcgagcacgtgattgtggcgctcggcgagctccacctcgagcgctgcgtcaaagacctc
accgagcgcttcgccaaggtccctctgcacgtgtcggagccgctcgtgggctttcgcgag
acgatcgtcgccaacgagacggggggcacggccttgctgagcacgatcttcaaggacctc
aagctggccgagatgacgaccagcacgacggccgacggcaagcacaagacgctcgtgtgt
ccgacgccggacggccaagtcgccgtgcacttgcgcgcggtgccgctgccaccggcagtc
gtcgacgtgcttgaggcccacgcggaagactggaagcgcttccacagcaccgacgacgat
gcggacgtcgccacgtacgtccgacattcttcacatgataaactaagagcgaggaggctg
cggaccgaggtgcggacggagctccaagctgtcctcgcggcctgcgacgacgccttttgg
aagacgatggacctcgaccgtctctggagctgtggtcctcgccgggtgggtccgaacctc
ttgatcaacaacgtgcccgactggtcatcgccctcgaccatctgggtgctgaaccgcggg
ctcgtgaccgacgagcgcatgaagctcgagtcgtcgctcgtctcgggctttcagctggcg
acggccgccggcccgctctgcgacgagcctgtgtggggcgtcgcgttcgtcgtcgacgac
attgtgctgacgccggtggacgcggacgcggaggccgtctacggcccgctgagcggccaa
gtcatctcgagcatcaagtcgggttgccgcagcgccttcttgcacgcgcccgtgcgcctc
gtcgaagccatgtacaagtgcacggtgcagtgtcaatcggagcagctcggcaagctctac
agtgtgtttgccaagcgccgggcgcgcgtcgtcggcgaagagctcgcggacggcagcgcg
ctcttcagcgtcgaggcgtatctgccggtcgtcgagagctttggctttgcgaccgagctc
ctcaagaacacgagcgggaacgcgagcaacccgcagctgctctttgaccactgggccgtc
atgcccgacgacccgttcttccagccgacgacggacgaggagcgcgaagactttggcgag
gcgatcgcagagcacaacgcggtgcggaagctcctcgagggcgtccggaagcgcaagggt
ctctcgcgcgaagagaagatcgtcgtccacgccgagaagcagcgcacgctcggccgcaac
aagtag
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integrated database retrieval system