Saprolegnia parasitica: SPRG_03004
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Entry
SPRG_03004 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
spar
Saprolegnia parasitica
Pathway
spar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPRG_03004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_03004
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SPRG_03004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Usp
Motif
Other DBs
NCBI-GeneID:
24125538
NCBI-ProteinID:
XP_012196976
UniProt:
A0A067D0E6
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSRHRNFRNRAYSYDDEEYDEDYYDEEPYSPNSQAHVYRRDSPTESVFSFLEQQPKDAEA
FDDSELIQPILDQIKRTFDVGVMPHATLVEQVRSNNYDVDKTVIALMELKKKTTSMTAVA
SLPKQIVIPRLETLVLDEPKAKAVPAPKKVEAQPVVSASNAALVGYQLTPTERAAFEKAE
KASQDKCLGAMTADVDAKHKISMVVIGHVDAGKSTITGHLLFSLGYVSKQVMHKYEKQSR
EAGKSSFAFAWVMDADEEERLRGVTMDVGTSYFQTSTKHVTLLDAPGHRDFIPKMIAGAS
QADVAVLVVPASTGEFEGAFMKDGQTKEHTLLVRSLGVTQLIVAVNKMDSINWAKDRFDF
IVETLTAFLQQSGFKLDQLRFVPVSGLSGGNLIAPLPATDCPWYKGPTLVGAIDGFYPPQ
RPITKPFRMGISDISKSMSLGQTVSGRIYAGAVSTGDTLLLMPGGLRLTVKGMEQNGGSI
LMASAGDNVDLGVTGIDPSALSVGNILCSVASPIKLVRRFEAQIMTMPGVEVPLVKGAYM
TFHIHSIDEPVNITRLVSLLKKSGEVEKKKPRCITRNCSAVVQITCTRPICLELFADFRQ
LGRFTLRDRGATLAAGIITEILA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccaccgcaacttccgcaaccgcgcctactcgtacgacgacgaagagtacgat
gaggactactatgacgaggagccgtactcgcccaactcgcaggcccacgtgtaccggcgc
gactcgccgaccgagtctgtcttctcgttcctcgagcagcagcccaaggacgccgaggcc
tttgacgactcggagctcatccagccgatcctggaccagatcaagcgcacgttcgacgtc
ggcgtcatgccgcatgcgacgctcgtcgagcaagtgcgcagcaacaactacgacgtcgac
aagacggtgatcgcgctcatggagctcaagaagaagacgacgtccatgacggcagtcgcg
agcctgcccaagcagattgtgattccgcgcctcgagacgctcgtccttgatgagcccaaa
gccaaggccgtaccagcgcccaagaaggtcgaggcgcaaccggtggtctctgcctcgaac
gcagcgctggttggctaccagctcacgccgacggagcgcgcggcgttcgagaaggcggag
aaggcgagccaggacaagtgtcttggcgccatgacggccgacgtcgacgccaagcacaag
atcagcatggtcgtgatcgggcacgtggacgcgggcaagagcacgatcacgggccacctc
ctcttcagcctcggctacgtgagcaagcaggtcatgcacaagtacgagaagcagtcgcgc
gaggccggcaagtcgtcgtttgcgtttgcgtgggtcatggacgccgacgaggaagagcgc
cttcgcggtgtcaccatggacgtgggtacgtcgtactttcagacatcgaccaagcacgtg
acgctgctggatgcaccggggcaccgcgactttatccccaagatgattgccggcgcgtcg
caagccgatgtcgccgtccttgtcgtacccgcgtcgacgggcgagtttgaaggcgcgttc
atgaaggacggccaaaccaaggagcacacgctgctcgtgcgcagcctcggcgtgacgcag
ctcatcgtcgctgtcaacaagatggattcgatcaactgggcgaaagaccgctttgacttc
atcgtcgagaccctcacggcgttcctccagcagtcgggcttcaaactcgaccagttgcgt
tttgtgccggtgagcggtctctcgggtgggaacctcattgcgccgctgcccgcgaccgac
tgcccgtggtacaagggcccgacgctcgtgggggccatcgatggcttttacccgccgcag
cgcccgatcaccaagccgttccgcatggggatttcggacatttccaagtcgatgagcctc
gggcagacggtgtcgggccgcatctacgcgggcgccgtctcgactggcgacacgctgctc
ttgatgccgggtggtctccgtctcacagtcaaggggatggagcagaacggcgggtcgatt
ctcatggcgtcggctggcgacaatgtcgatttgggcgtcaccggcattgatccaagtgca
ctgagcgtcggcaacattctctgctcggtcgcgtcgcccatcaagctcgtgcgccggttc
gaggcgcagatcatgacgatgccgggggtcgaggtgccgcttgtgaagggcgcgtacatg
acgttccacatccacagcatcgacgagcccgtcaacattacgcggctcgtgagccttttg
aaaaagtcgggcgaagtcgaaaagaagaagccgcgctgcatcacgcgcaactgctcggct
gtcgtgcaaatcacgtgcacgcggcccatttgcctcgagctctttgccgactttcgccag
ctcggccgctttacactgcgcgatcgtggtgcgacgctcgccgccggcatcatcaccgag
atcctcgcctaa
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