Saprolegnia parasitica: SPRG_18096
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Entry
SPRG_18096 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
spar
Saprolegnia parasitica
Pathway
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_18096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spar03041
]
SPRG_18096
Spliceosome [BR:
spar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
SPRG_18096
Complex C
U4/U6.U5 tri-SnRNP related factors
SPRG_18096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
24139622
NCBI-ProteinID:
XP_012212916
UniProt:
A0A067BPW6
LinkDB
All DBs
Position
Unknown
AA seq
219 aa
AA seq
DB search
MNATDVGVTHVHGVNPQHLVEKILRNRIYDCMYWKEHCFGLTEETLVEKAIELSYIAGHF
GGNQQPSPFLCLLLKMLQMQPDMDVVMTFIENGDYKYVTALGAMYLRLTGKPVEIYPVLE
NLLSDYRKVRFRKTMGWDVLHMDEVADLLLREEYFCNIALPRLVDRFQLETMNLLPKRKS
ALDEALLSDDDDDDEDDDDDDDDGDDPMGAKSEDDSADE
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaccgacgtgggcgtgacccatgtgcatggcgtgaacccgcagcatctcgtg
gagaagatcctccggaatcgcatctacgactgcatgtactggaaggagcattgctttggc
ctcacggaagagacgcttgtcgagaaggcgatcgagctcagctacattgcgggccacttt
ggcggcaaccagcagccgtcgccgttcctgtgcttgctcctcaagatgctgcagatgcag
cccgacatggacgtcgtcatgacatttattgagaatggcgactacaagtacgttacggcg
ctcggcgccatgtacttgcgtctcacgggcaagcccgtcgagatctaccccgtgctcgag
aacctcctctccgactaccgcaaggtgcgcttccgcaagacgatgggctgggacgtgctg
cacatggacgaagtcgcggacctcctcctgcgcgaagagtacttttgcaacattgcactg
ccccgcttggtcgatcgcttccaactcgagaccatgaacctccttccgaagcgcaagagt
gcgctcgacgaagcgctcctctccgacgacgacgacgacgacgaagatgatgatgatgac
gatgacgatggcgatgatccgatgggcgccaagagtgaggacgatagtgcggacgagtaa
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