Sphingomonas paucimobilis: DRN02_004355
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Entry
DRN02_004355 CDS
T06034
Name
(GenBank) DEAD/DEAH box helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
spau
Sphingomonas paucimobilis
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spau03400
]
DRN02_004355
Enzymes [BR:
spau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DRN02_004355
DNA repair and recombination proteins [BR:
spau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
DRN02_004355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QBE91344
LinkDB
All DBs
Position
complement(942602..945721)
Genome browser
AA seq
1039 aa
AA seq
DB search
MRPETTALTILSTARARAKMHEFRVAPADFNALPRDPSLLFSLAIGILGDVAAAVADTLD
IAGVAPAALPQPPGWDELDEDPQDVLRFSSVFFDAYLNAQLDANLDTEFSLLCAAAYYIA
GNVGSATVIIRHMTEPGLDLAGGLGHLVYSILKNSFVPAEAAHAHQAATTELLQALAGYF
SFEAGADGIAEACRRIREYFHRSGSPRELLYADIAGALCALKLRNSARTILPTASGLAPD
AWRQALAKSHFPIELWPAQQRIADAGVFAGRSVVIQMPTSAGKTRATEIIIRSAFLSGRA
HLAVIVAPYRSLCHDIRGDLVTAFAGENVRLDEASDAYQFDLALDALFAEDSVLIVTPEK
LLYMMRRAPDIAQRIGLVIYDEGHQFDGMTRGPTYELLLTSLRMSLPAQTQIILISAVIG
NAPDVAAWLIGDADAVVGAEGLLPTTKSIAFASWQDQRGRLEYVKPEDPAEREYFVPRII
SDIALPLRGRETAQRRFPEKTGGDVGLFLGLHVVRNGSVAIFCGRKDSVTKICSRAVEIV
DRGVALEWPIETSDAAEVEKVRALCELELGAGASATRSAGLGIFAHHADTPHGIRLSIEH
AMKEGLAKFVICTSTLAQGVNFPLKYLIVTSTRQGGEQILVRDFHNLMGRAGRAGMHTEG
SVIFSTPSIYDQRQQFRGRWTWDRATELLDARNSEPSRSSILALFDAYQQRQPPIVQEVP
PDWLDLAFADTARIDEVVDAALAAQPNISEREFRRFIEGRARAVQNIAAFLVANMTFAEG
EDVAARIGELAANTLAYHLADEGTRVRLVEVFRSIGDSITANTDGDQRALIRRSPLPPAA
VAELQTWLTENLETLQTAVQENRLFAEISPLALRFTTSRAIQAISDQNLVPRSLEEWVAG
RSYAVIFDILAEARVRVGRDHVTVEDAVALCESGFGYDVAMIVASIADLTEGLDDALHTG
VSLLQKQIKYGLTDRAAIAFHEAGFADRHVASLLGLVWGNVVDRGGVRAACQQEEIVRAV
LAHIPSYFVKVAAELGGWA
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctgagacgaccgcgctcaccatcctatccaccgcgcgagcacgggcaaagatg
cacgaattccgcgtcgcgccagcggacttcaatgcgttgccgcgcgacccgtcgctactc
ttctcattggcaatcggcatcttgggagatgttgcggccgccgtcgcagatacgctcgat
attgcaggagtggcaccggccgcgcttcctcaaccgcccggctgggacgagttggatgag
gacccgcaagatgtgctacgcttttcctcagttttcttcgatgcatatttgaacgcgcag
ctcgatgccaacttagacaccgaattttcactcctgtgcgcagcggcatactacatcgcc
gggaatgtcggcagcgcgacggtaatcattcggcacatgacagagccgggcctcgacctc
gcgggcgggcttggtcatctcgtctacagcatcctcaagaacagcttcgttccggccgag
gcggctcatgctcatcaagcggcgacgactgagcttctccaggcgctagccggctatttc
agcttcgaggccggggcggatggcattgccgaagcgtgccgcagaatccgcgagtatttc
caccgatccggctcaccgcgcgaattgctctacgccgacattgctggcgctttgtgtgcg
ctcaagcttagaaattctgcccggacaatcctgccaacagcatcaggcttggcgccggac
gcgtggcgccaagcgctcgcgaagtcgcattttccgatcgaactctggcctgctcagcag
cggatcgcagatgctggtgtgttcgctggacgttccgtggtcatccagatgccgaccagc
gctggcaagactcgcgccaccgaaatcatcattagatcggcctttctatccggtcgagca
caccttgcggtgatcgtcgccccctatcgttcgctctgccacgacatccgaggcgacttg
gtaacggcttttgccggtgagaatgtgcgcctggacgaagcatcagacgcctatcaattc
gatctcgcactcgatgcgctgtttgccgaagactctgtgctcatcgtgacgcccgaaaag
ctcctctatatgatgcgccgggctccggacatcgcccagaggatcggattggtgatctat
gacgaaggacatcaattcgacggaatgacccgggggccgacctatgaactcctcctcact
tcgctgcgcatgtcgctccccgctcaaacccagatcattctcatctctgccgtgatcggc
aacgcgccggatgtcgctgcatggctgatcggcgatgccgatgcggttgtcggtgccgag
ggtctgctaccgacgaccaaaagcatcgcttttgcgagctggcaggaccaacgcgggcga
ctcgaatacgtgaagccggaggatccggctgagcgagaatatttcgtgcctcgcattatc
agcgacatcgctctaccgctccgcggcagggaaactgcccagcgtagatttcctgagaag
accggcggcgacgtcggtctgttcctggggctgcacgtcgtgcgcaacggcagtgttgcg
atcttctgcggccgaaaagacagcgtgacgaaaatctgttcgcgtgctgtcgagatcgtc
gatcgcggggtcgcccttgaatggccgattgaaacctcggacgccgcagaggtagagaag
gttcgcgcgctttgcgaacttgagctcggagctggcgcgtcggccacccgctcagcgggg
ctgggaatattcgctcatcatgccgacacgccgcacggcatcaggctctcgatcgaacat
gctatgaaagaggggctggcgaagttcgtcatttgtacctcgacgctagcccaaggcgtg
aatttcccgctcaaatatttgattgtcacatcgacgcgccaaggcggcgaacagattttg
gtgcgcgacttccacaatctgatgggtcgtgccggtcgcgcaggaatgcacaccgaaggc
agtgtcatcttctcgaccccgtccatctatgatcagcggcagcaatttcgcggccgatgg
acgtgggaccgcgcaaccgaactgctcgatgctcgaaactctgaaccctctcgcagctcg
atccttgcgttgttcgatgcgtatcagcagcgccaaccgccgatcgtccaagaggttccg
cccgattggctcgacctcgctttcgccgataccgcccggatagacgaggtcgtggacgca
gcgctcgccgcgcaacctaacatcagcgagcgggaattccgccggttcatcgaaggtcgc
gcccgcgctgtccagaatatcgccgccttcctcgttgccaatatgacctttgccgaggga
gaggacgtcgcagcgcggatcggtgaacttgccgctaatacattggcttatcaccttgct
gacgaggggacgcgggttcgtctcgtcgaagtgtttcgatcgatcggggattcgatcacg
gccaacaccgatggcgaccagcgcgcgcttattcgacggtcgccgctaccgccggcggcg
gtcgcagaactccaaacttggttgactgagaacctggaaaccctgcagaccgcagtgcaa
gagaatcggctattcgccgaaatctctccgttggcacttcgtttcaccacgtcccgcgcg
atccaggcgattagcgatcagaatttagttccgcgctctcttgaggagtgggtggcaggc
agatcctatgccgtgatctttgacatattggctgaggcaagagtccgggtcgggcgtgac
catgtcaccgtcgaagatgctgtcgcgctgtgcgagagcggcttcggctacgatgttgcg
atgatcgttgcgtcgatagcggacctgaccgagggcttggacgacgcactgcacacgggc
gtcagcctgctgcaaaagcagattaaatacggcctgactgatcgcgcggcgattgcgttt
cacgaggccgggttcgcggataggcatgtagcgagccttctcggtctcgtctggggaaat
gtggtcgaccgcggcggcgtccgcgcagcttgccagcaagaggagattgtacgcgcggtg
ctcgcgcacattccgagctatttcgtaaaggtcgctgctgagcttggaggatgggcctga
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