Streptomyces parvulus: Spa2297_04340
Help
Entry
Spa2297_04340 CDS
T04685
Symbol
ligB
Name
(GenBank) ATP-dependent DNA ligase
Organism
spav
Streptomyces parvulus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ANJ06280
UniProt:
A0A191UUB6
LinkDB
All DBs
Position
955479..957017
Genome browser
AA seq
512 aa
AA seq
DB search
MLLARLAQVSREVAGTSARSRKTALLAELFREAEAADVPVVIPYLAGRLPQGRIGVGWKV
LSRPVAPADEPTLTVRDVDARLTALASVTGTGSQAERARLIGELMGAATEDEQRFLTGLL
TGEVRQGALDAAAVEGLAAATEAPSADVRRAVMLAGSLQAVAEALLADGPGALSRFRLTV
GRPVLPMLAHSASSVAEAVGKLGTCAVEEKLDGIRVQVHRDGGTVRLYTRTLDDITDRLP
EVTEAALALPGERFILDGEVLSLDGSGRPRSFQETAGRVGSRTDVATASRTVPVSAVFFD
ALSVDGHDLLDLPLTDRHAELARLVPEPERVRRTLVGGPEDTPAAEEFLAETLRRGHEGV
VVKGLDAGYSAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGRLSNLHLGARTADGSFA
MLGKTFKGLTDALLAWQTERLGRLAVEEHPWGVTVRPELVVEIAYDGLQRSTRYPAGVTL
RFARVVRYREDKRAEDADTVDTLLATHPGVAP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttgcccggttggcccaggtgtcgcgggaggtcgccggcacctcggcgcggtcc
cggaagaccgccctgctcgcggagctgttccgggaggcggaggcggcggacgtgccggtc
gtcatcccctatctggcgggacgcctcccgcagggcaggatcggcgtcggctggaaggtg
ctgagccgcccggtcgcgccggccgacgagcccacgctcacggtccgcgacgtggacgcc
cggctcaccgccctcgcgtcggtgaccggcaccggttcgcaggccgagcgggcgcggctg
atcggcgagctgatgggcgcggccaccgaggacgagcagcgcttcctgaccggcctgctc
accggcgaggtccgccagggagccctggacgcggccgccgtcgagggcctggccgcggcg
accgaggcgccgtcggcggacgtacgccgggcggtgatgctcgccggttccctccaggcg
gtggccgaggccctgctcgcggacggtcccggcgccctttcccggttccggctcaccgtg
ggccggcccgtgctgccgatgctggcgcacagcgcctcctcggtcgccgaggcggtcggc
aagctgggaacctgcgcggtcgaggagaagctggacggcatccgcgtccaggtgcaccgc
gacggcggcaccgtccgcctctacacccgcaccctggacgacatcaccgaccggctcccc
gaggtgaccgaggcggccctcgccctgcccggcgagcggttcatcctggacggcgaggtg
ctctccctggacgggagcggccgcccccggtccttccaggagaccgccggacgggtcggc
tcccgcaccgacgtggcgaccgcctcgcggacggtcccggtctccgcggtgttcttcgac
gcgctctccgtcgacggccacgacctgctcgacctgccgctcaccgaccggcacgcggag
ctggcccggctggtccccgagcccgaacgggtgcggcgcaccctggtcggcgggcccgag
gacacaccggccgccgaggagttcctggccgagaccctgcggcgcggccacgagggcgtc
gtcgtcaagggactcgacgccggctacagcgcgggccgccgcggcgcgtcctggctcaag
gtcaagcccgtccacacgctcgacctggtcgtgctcgccgccgagtggggccacggccgc
cgcaccggcaggctgtccaacctccacctgggcgcccgcacggccgacggctccttcgcg
atgctcggcaagaccttcaagggcctgacggacgcgctgctggcctggcagaccgagcgt
ctcggccggctggccgtcgaggagcacccctggggcgtgaccgtacgccccgaactcgtc
gtcgagatcgcctacgacggcctccagcgctccacccgctacccggccggcgtcaccctg
cgcttcgcccgcgtcgtgcgctaccgcgaggacaagcgggccgaggacgcggacaccgtg
gacaccctgctcgccacgcacccgggggtcgccccgtga
DBGET
integrated database retrieval system