Solanum pennellii: 107007819
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Entry
107007819 CDS
T04130
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X2
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107007819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107007819
Spliceosome [BR:
spen03041
]
Common components
Common spliceosomal components
SR proteins
107007819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
107007819
NCBI-ProteinID:
XP_015062100
LinkDB
All DBs
Position
1:complement(104041031..104048264)
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AA seq
254 aa
AA seq
DB search
MSHFGRTGPPDIADTYSLLVLNITFRTSADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA
FVRYKYAEEAQKAVDRLDGRVVDGREMAVQFAKYGPNAERIHQGRIIEKVPGFKGSSRSR
SPRRRYRDDYHRDREYRRSRSRSVDRYERDRYRQRERVYRHRSRSRSLSPDYDRDRGRGR
DRKHHRRSPSVDSASPSRRSPSPHRKESPPRSLSPTKGSPVRRVRNERSPTPRSRSPPGR
AMDSRSPSPRVDED
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcgggagaactggcccgccggacatcgctgatacttactctctcctcgtg
ctcaacatcactttccgtacctcggcggatgatctctttcctcttttcgacaagtatggg
aaggttgtggatatcttcattccccgggacagaaggaccggtgagtcacgtggatttgcg
tttgttcgttacaagtatgcagaggaagcacaaaaggctgtagataggcttgatggaaga
gtggttgatggacgggaaatggctgttcaattcgccaaatatgggccaaatgcagaacga
attcaccaagggaggatcattgagaaagttcctggcttcaagggaagctcaagaagcaga
agccctcgtagaagataccgtgatgactatcacagagatagagaatacaggagaagtagg
agcagaagtgttgatcgctatgagcgtgatagatatcggcagagagagcgggtctatcgc
catcggtccaggagccgcagcttaagtccagactatgatcgagatcgtggcaggggacgg
gacagaaaacatcataggcggagcccatcagttgacagtgcctccccatctcggcgtagc
cccagtcctcacaggaaagagtctcctcctagaagcttatcacccacaaaaggaagtcct
gtgaggcgtgttcgcaatgaacgctctccaactcctcgaagtcgttcgcctccaggtcga
gcaatggattcacgaagcccttctcctcgtgttgatgaggattag
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integrated database retrieval system
