KEGG   Solanum pennellii: 107011047
Entry
107011047         CDS       T04130                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107011047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107011047
   03041 Spliceosome [BR:spen03041]
    107011047
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107011047
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107011047
Spliceosome [BR:spen03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107011047
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 107011047
NCBI-ProteinID: XP_015065852
LinkDB
Position
2:complement(16847273..16851447)
AA seq 424 aa
MDLSKKRKADENGGAYPVKTELVTTAAAPPALAVLSPEDIDKILETFTKDQCVSILRNAA
LRYPDVLEGLRAVADADVSNRKLFVRGLGWETTTDKLRQVFSEFGELDEAVVITDKASSR
SKGYGFVTFKHVDAAILSLKVPNKIIDGRVTVTQLAAAGNSGNSQSSDVALRKIYVGNVP
FEISSEKLLNHFSMYGEIEEGPLGFDKQTGKAKGFAFFVYKTEDGARASLVDPVKTVEGH
QVLCKLATDNKKGKPQNMGHGGAPGMNAGPAGMPGDDRVGSMPGSNYGVPVSGMGPYSGF
SGGPGPGMQQPPPQPGMVAHQNPHLNSAIGGPGYGNQGPGSFTGGAGGYAGAGGYAGAGG
YGGNSGDYGGYRMPQSSAGMPSSGGFPDGGSYGLQSAYPTQVPQPGAGSRVPPGGMYQGM
PPYY
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggatctatcaaagaaacgcaaagctgatgagaacggcggtgcttatcctgtaaaaact
gaactcgtcacaactgccgccgccccaccggcacttgctgttctttccccggaagacatt
gacaaaattcttgaaacgttcaccaaggaccagtgcgtttcaattctccgtaacgccgcc
ctgcgctatcctgatgttctcgaaggtttacgtgctgtcgctgacgccgacgtatctaac
cgcaagcttttcgttcgtggtcttgggtgggagaccaccactgacaaactcagacaggtt
ttttctgagtttggagaacttgatgaggctgttgttataactgataaggcgtcttccaga
tctaaggggtatggttttgtaactttcaagcatgttgatgctgctattctttctttaaag
gtgcccaacaagataattgatggacgtgttaccgtcacacagcttgctgctgcgggtaat
tctgggaattctcagtcttctgatgttgcgcttaggaagatctatgttggtaatgtccca
tttgaaatttcgtctgaaaagcttttgaatcacttttccatgtatggagagattgaagag
gggcctttgggatttgataaacaaactggaaaagcgaaaggatttgctttttttgtctac
aagactgaggatggagctagggcatcgttagttgatcccgtgaagacagtagaaggacat
caggtcttgtgtaaattggcaaccgataataagaaggggaagccgcagaatatggggcac
gggggtgcccctggaatgaatgctggacctgcaggaatgcctggtgatgatagggttgga
tccatgcctggttccaattatggtgttcctgtaagcggtatgggtccatattcagggttt
tcaggtgggcctggtccaggaatgcagcagccaccacctcagcctgggatggtggcacat
cagaatccacatctgaattcagctattggcgggcctggatatggaaaccaaggaccggga
tcctttacaggtggtgctggtggatatgctggcgccggtggatatgctggcgctggtggg
tatggtggtaattctggggattatggtgggtacaggatgcctcaaagctctgctggaatg
cccagttcaggaggttttccagatggtggtagttatggtttacagtcggcttatccgaca
caggtaccacaaccaggagctgggtcaagagttccaccaggtgggatgtaccagggcatg
cctccatactactga

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