Solanum pennellii: 107011627
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Entry
107011627 CDS
T04130
Name
(RefSeq) DNA ligase 6 isoform X2
Organism
spen
Solanum pennellii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
107011627
NCBI-ProteinID:
XP_015066696
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All DBs
Position
2:complement(56854368..56873832)
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AA seq
1441 aa
AA seq
DB search
MSSDAGTLTLDSTTLYITALNSLSDKSSSNSIPLSLPLPPIPSSIPQPKLIPRTRFIIDG
FKYAADFSVSYFLSHFHSDHYTGLSSNWSKGIIFCSSTTANLLIEVLNVPAQYVVSLPLS
EAVLIDGSEVFLIDANHCPGAVQFLFKVPVSDGKFERYVHTGDFRYCDDMKLEPVLNAFV
GADAVFLDTTYCHPKFIFPSQQESIDYIVGVIEKNGVENEGSLKNILFLIATYVIGKEKI
LMEVSRRCQRKIHVDGRKMSVLGVLGHGEDGVFTTVESETDVHVVGWNVLGETWPYFRPN
FEKMDKIMNEKGYSKVVGFVPTGWTYEVKRNKFSVRKKDSFEIHLVPYSEHSNYDELREY
VKFLKPKHVIPTVGTDVEKLDSKHANAMRKHFAGLVDQMAIKQEFLMRFHPSVQGKEDVD
TKESGLALVRITEQENTNRSTHTPVSIIKQENEDTSSDSKSCNAADMDTVIPSSFPQGES
VSPGLEKISEGDMEEILEELQGCLPTWVTKGQMLDLVGISDKNVVDAVSYFYEHETEYRE
QVTASNSVTSSLEANSANKSALPCKPCLGKSLQQDETAASSKTVKLPIMDSSCSKKVSPG
KRKRSTGNKSSSSSNKVSPGKRKRSTGNKSFEKAKGHTSMESGGPKQCTITKFFSKTLPL
PLQNRNSEADSKNFHDDSCMLPNASIEAYKEEADRFIQIMNGDDSLRSYATTVLAKTKGD
ISMALDIYFSEYKDVGETNGDGISKTNKLLQPQCAKEVYTSSKDDKLPKILGDVDANLSL
CGVPFADNAVNYVSLPHEKYSPVEHACWSKGQATPYIHLARTFELVKEEKGKIKATSMLC
NMFRSLLALSPEDVLPAVYLCTNKIAPDHENMELNIGGSTVVAALEEACGTKKSKVRELY
NSLGDLGDVAQLCRQTQSLLAPPVALTVRGVYSALRRISLQAGSGSAIRKKSLIVNLMCS
CREKEMKFLVRTLVRNLRIGAMMRTVLPALAQAVVFNSTPYEGLVENLKDCLQRLSAEVV
EAYNILPSLDVLVPSLMEKGIEFSSNTLSMAPGIPIKPMLAKITNGVPQVMKLFQNKAFT
CEYKYDGQRAQIHKLSDGSVRVFSRNGDETTARFPDLVNIITESCDSRGATFILDAEVVA
IDRQNGPKLMSFQELSSRERGSKDSIIALDKIKVEICIFVFDIMFANGEQLLNLPLRQRR
KYLKDLFGDGKVGYLEYATEMTVECDDACADDEATLARMNSFLNDALHASCEGIMVKSLD
EDAGYTPSKRSDAWLKVKRDYVEGLNDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPDTE
EFQSVCRVMSGFSDSFYVEMRDFFDADKICQKKPPYYRSEEVPDMWFSPEVVWVIRGADF
TVSPVHHAAIGLVHPSRGISVRFPRFIRCLSDRKPEECSTSADIADMFRTQIRKMDVKVE
K
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgacgccggaaccctaaccctagactcaaccactctgtacataaccgctctc
aactccctctctgataaatcctcatcaaattcaatcccattgtcccttcctctccctcca
atcccttcttcaatcccccaaccaaaactcatcccaagaactcgctttatcatcgacggt
tttaaatatgccgctgatttctccgtttcttacttcctctcccattttcactccgatcac
tatacaggcctctcctctaattggtctaaaggtatcatattctgttcctccaccactgct
aaccttctcatcgaggttctcaatgttcctgcgcaatatgtagtatctttaccgctctcc
gaagcggttttaatagacggttctgaagtttttctcatcgatgccaatcattgtcctggt
gctgtgcagttcttatttaaagttccagttagtgatggaaaatttgagcggtacgttcac
acaggtgattttcgttattgtgatgacatgaaattagagcctgtattgaatgcatttgtg
ggtgctgatgctgtatttttggatacaacttattgtcatccgaaatttatattccctagt
caacaggagtcaattgattatatagttggagttatagagaaaaatggagttgagaatgag
ggttcattgaaaaatatcttgtttcttattgctacttatgtcattgggaaagagaagatt
ttaatggaggtttcacggaggtgtcagagaaagatccatgttgatggacgaaaaatgtcg
gttttaggagtattaggtcatggggaggatggagtatttactaccgttgagtctgaaact
gatgttcatgttgttgggtggaatgtattgggtgagacttggccatatttcaggcctaat
tttgagaaaatggataagatcatgaatgagaaaggatattccaaggtggttggttttgtc
cccacaggttggacttatgaagtgaagcggaataagttttcagtgagaaagaaagattcc
tttgagatacatcttgttccatatagtgaacattcaaattatgatgagcttagagaatat
gtgaaatttttgaaaccaaagcatgtcatcccaacagtaggtacagatgttgagaagctg
gatagcaaacatgcaaatgccatgcggaagcattttgctggcttggttgatcagatggcc
atcaagcaagaatttctaatgcgttttcatccttctgtccaagggaaggaagatgtagat
acaaaagaatctggtcttgctttagttagaattacggagcaagaaaacacaaacagatct
actcatactccagtcagtatcatcaaacaagaaaatgaggatacttcatctgattctaaa
agctgcaatgctgctgatatggatactgttatcccttcctcatttcctcaaggagaatct
gtgtcgccaggtttagaaaaaataagtgaaggtgatatggaggaaatactagaagaactt
caaggctgtttgcccacttgggtaactaaaggtcagatgttggatttagttggtatttca
gataaaaatgttgttgatgcagtctcatacttttacgaacatgaaacagaatatcgtgaa
caggtcactgccagtaattctgttacctcttctttagaggcaaactcagcaaataagtct
gcattgccttgtaaaccatgtcttggtaaaagcctgcagcaagatgagacagctgcgtca
agtaaaactgttaaactacccatcatggacagttcctgtagcaaaaaagtttctcctggt
aaaaggaagagaagtactggaaacaagtccagttccagtagcaacaaagtttctcctggt
aaaaggaagagaagtactggaaacaagtcatttgagaaagcaaaaggacatacgagtatg
gaatctggtggaccaaagcaatgtactataacaaagttcttcagtaaaacgctgcctctt
cctttgcagaatcgaaacagtgaagccgatagtaaaaatttccatgatgatagttgcatg
ctaccaaatgcctctattgaggcttataaagaggaagctgatcggtttattcagattatg
aatggggatgactcattgagaagttatgctaccacagtactagcaaagactaaaggagac
ataagtatggcacttgatatttatttttcagaatacaaagatgtaggagagactaatgga
gatgggatttctaaaacaaacaaattgttgcaacctcagtgtgctaaagaggtttacact
tcttccaaagatgataaattacccaaaatattaggagatgttgatgccaatttgtcgttg
tgtggtgttccctttgctgataatgctgtaaattatgtatcacttccccatgagaaatac
tctcccgtggaacatgcttgctggagtaaggggcaggctactccatacatacatcttgca
cgaacttttgaattggtaaaggaagaaaaagggaagataaaagcaacgtcaatgttgtgc
aatatgtttcggagcttgctagctttgtctccggaggatgtgcttcctgctgtgtacttg
tgcacaaacaagatagcccctgaccatgaaaatatggaattgaacattgggggtagtact
gttgtagcagcactagaggaggcatgcgggacaaagaaatcaaaagtacgagaactatac
aacagcctcggtgatcttggtgatgttgctcaactttgccgacaaacacaatcattactt
gctcctccagtggcacttacagttaggggtgtatactctgctcttagaaggataagcttg
caagcaggtagtgggagtgccatccgaaagaaaagcctgattgtcaatctcatgtgttca
tgtagagagaaggagatgaagtttcttgtgagaacgttggttcggaatttgcgcattgga
gccatgatgagaactgttcttcctgcattagctcaagcagttgtgttcaattctactcct
tatgaaggactggtcgaaaacctgaaagattgtctgcagcgactttcagcagaagtagta
gaagcgtataacatccttcccagcttggatgtacttgttccttccttgatggagaagggg
attgagttttcttcaaatacattgtcaatggctccaggcatacccatcaaaccaatgctt
gcaaagattactaatggggtccctcaagtgatgaagctctttcagaacaaagcctttaca
tgtgaatacaaatatgatggtcagcgagctcagattcataaactgtctgatggttcagtc
cgtgtattttcaaggaatggggatgagacaacagctagatttccggatttggtaaatata
attacagaatcatgtgattccagaggagcaacatttatcttggatgcagaggttgttgca
attgataggcaaaatggtccaaagctcatgtcgttccaagaactatcttcacgtgagagg
gggtccaaagattccatcattgcgttagataaaattaaggttgagatatgcatttttgtt
ttcgatatcatgtttgcaaacggagaacaattgttgaatctgccgctccgtcaaaggcga
aaatatttgaaggatttatttggtgatggcaaagtaggttatttagagtacgcgacagaa
atgactgtagagtgcgatgatgcttgtgcagatgatgaagctacactggctaggatgaac
agctttcttaatgatgcactacatgcttcatgtgaagggatcatggtgaagtcccttgat
gaagatgctggatacacaccctcaaagcgctctgatgcatggttaaaggtcaagagagac
tatgttgaaggattaaatgattccctggacttggttccaattggtgcatggcatgggaat
ggaagaaaagcaggatggtatagtcctttccttatggcctgctacaaccctgacacggag
gaatttcagagtgtctgccgggtcatgtctgggttttctgattccttctatgtagagatg
agagacttcttcgatgcggacaagatctgccagaaaaagccaccctactaccgaagtgaa
gaggttccggatatgtggttttctccagaagttgtgtgggtgataaggggtgctgacttc
acagtgtcaccagtgcatcacgcagctattggtttagtccatccatcgcgtggtatttct
gtcagattccccaggttcatccggtgtttgtcagatagaaaacctgaggaatgtagcaca
tctgcagatatagctgacatgttccgcactcagattagaaaaatggatgtgaaggttgaa
aaatag
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