Solanum pennellii: 107016139
Help
Entry
107016139 CDS
T04130
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spen01002
]
107016139
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107016139
04121 Ubiquitin system [BR:
spen04121
]
107016139
Enzymes [BR:
spen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107016139
Peptidases and inhibitors [BR:
spen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107016139
Membrane trafficking [BR:
spen04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
107016139
Ubiquitin system [BR:
spen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107016139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
107016139
NCBI-ProteinID:
XP_015072113
LinkDB
All DBs
Position
4:61432668..61445382
Genome browser
AA seq
566 aa
AA seq
DB search
MNIHSSSLVHKFKHGFNSHWFTVQVSVAATVLSIAGGLIFAIKDGAKITNIMLSSSKKDH
FTVPGLQNLGNNCFLNVVLQALASCKSFGKFLEQVVEEYEGSSMEGSRDLPVIAALASLV
EELCTVRHGRTVLSPRRLMHAMTSHIPGFNLTSQQDAEEALSHLLSSLRAELSESFVHDH
SSLADVITLPNCRIVTQRMKGESEQERWRQSFLGPFDGILGSFLNCQTCSFQISLDFQLF
HSLHLVPTSSSTGAIMPGCSVEHCLKQFFVAEQLENYKCSHCWHTAAEKYVSAMDENEAI
VEKLKLCNEEDSCDCKQLASLARFPWSNSFSRTFKQLSIGRSPKVLCLHLQRASINVFGE
QNKLQGHISFPLILDLAPFVKSGVGTKSWEENLQIGQITHQQPFPLFNNLNLQANQEMLT
FITQSERKFSTEVEDMAGLRDSDNFGIKAPKSKSSLLEAGDDKKISLNQLAPHSGNQGET
SRITHSISHKYQLTSVVQHFGIVGSGHYTVFRRVTDKISEDNHAELLGSAVGKWFCISDT
EVYGVSERDVLDAEATLLFYEKVSDC
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacactcgtcttcacttgtacacaaattcaaacatgggtttaattcccattgg
tttactgttcaagtttcagttgctgctactgtattaagtattgctggtggtttgattttt
gctataaaagatggtgcaaaaatcacaaacatcatgctatcaagttcaaaaaaagatcat
ttcacagtacctggattgcaaaatcttggtaacaattgctttttgaatgttgttttacag
gctttagctagctgtaagagctttggaaaatttctggagcaagttgtggaggaatatgag
ggttcatcaatggaaggaagtagagacttgcccgttattgctgctttggcttcgcttgtt
gaagaattatgtactgtgcgacatggaagaactgttctaagtccaaggagattgatgcat
gccatgacttctcacattcctggtttcaatctaactagccagcaggatgcagaggaagca
ctctcccatcttttatcttctttaagagccgaactgtcagaatcttttgttcatgatcac
agctctttggcggatgtaattacacttcctaattgtaggattgttacacaaaggatgaaa
ggagaaagtgaacaggagagatggaggcagagttttcttgggccttttgatgggattctt
ggtagttttttaaactgccaaacttgttcgtttcagatctctctggattttcagttattt
catagtttgcatcttgtgccaacgtcaagcagcactggggctattatgcctgggtgttct
gtcgagcattgcctgaagcagttctttgttgcggaacaactcgagaactacaagtgcagc
cactgttggcatactgctgccgaaaagtatgtctctgccatggatgaaaatgaggctatt
gttgaaaaacttaagctgtgcaacgaggaagattcatgtgattgcaaacagctagcgtcc
cttgctagatttccatggtcaaatagcttctcacgcactttcaagcaactcagtattggc
cggagtcctaaggttctatgtcttcatttacaacgtgcttctataaatgtatttggagaa
cagaacaaacttcagggccatatttcatttccattgattttggacttggctcctttcgtg
aagagtggagtgggaacaaagagttgggaagagaatctgcaaattgggcaaatcacgcat
cagcagcctttccctttgttcaataacttaaatctgcaagctaatcaggagatgttgact
ttcatcacccaaagtgaaagaaaattttctacagaagtagaagatatggccggtttgcgt
gactcagataattttggtattaaagcaccaaagtcaaaatcaagtttgcttgaggctgga
gacgacaagaagatcagcttaaatcagctggctccacattctggaaatcagggtgaaact
tcccgaataacgcattccataagtcacaagtaccaactaacctctgtggttcagcacttt
ggaatagttggtagtgggcattacaccgttttcagacgagtgacagacaaaattagtgaa
gacaatcatgctgaactactgggatctgctgttggtaagtggttttgcatctcagacacc
gaagtatatggggtctccgagagagatgttcttgatgctgaagcaaccttacttttctat
gaaaaagtttctgattgctaa
DBGET
integrated database retrieval system
