Solanum pennellii: 107018526
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Entry
107018526 CDS
T04130
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
spen
Solanum pennellii
Pathway
spen04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107018526
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spen04040
]
107018526
Ion channels [BR:
spen04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107018526
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
107018526
NCBI-ProteinID:
XP_015074516
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Position
5:72339287..72344884
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AA seq
723 aa
AA seq
DB search
MMNPNQDKYVRFEEWKSEQSSFSIDNENSQDYRPFYVRKPSLSSLMSSVRRRFGRGSERI
SSWRKSIRVYPLIDKPTKDQYVEPKKKVHDPQGRFLQQWNKVFVLVCIIALSLDPLFFYI
PVIDSDKKCLDLDRTLKITACVLRSITDIFYIFHIILQFRTGYIAPPSRIFGRGELVEDS
YDIAKRYLLSYFIVDVVAVLPLPQIVILVITPNANGSIALATKEMLKIVIFAQYFPRIFR
IYPLYKEVTRTSGLFTESAWGGAVFNLSLYMLASNVIGAFWYLFSVERQDTCWRDACVKI
SGCSSNYLYCDKSSIGNASLLNSSCPLVKQEDIKDPNVFDFGIALDALQFRIVEKRNFWT
KLFYCFWWGLRNLSSLGQNLKTSTFVGEILFAVFISIIGLILFSLLIGNMQKYLQSITVR
VEEMRVRRRDAEQWMSHRMLPDILKERIRRHEQYKWQETRGVEEDLLLQDLPRDLRRDLK
RHLCWSFLKKVPIFEKMDDQLLDALCDRLKPALFTDKSFIIREGDPVEEMLFLMRGTLLT
MTTNGGRTGFFNSVYLKAGGFCGDELLTWALDPNTSSGSLPLSTRTVQAVTDIEAFAVTA
DDLKFVAAQFRRLNSKQIQHTFKFCSQQWRTWGACFIQVAWRRYCRNKLEKALRVEEDRL
QAALAKESSNTPSLGATIYASRFAANALRALRRKHATGAKLSPTLPLLLHKPSEPDFSEE
NDS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccaaccaggacaaatatgtaaggtttgaggaatggaagtcagaacaatca
tccttcagcattgacaatgaaaattctcaggattatagaccattttatgtcagaaaacca
tcgttgagctcgttgatgagcagcgttagaagaaggttcgggaggggttctgaaagaatt
agtagctggagaaaatcaattcgagtgtatcctctaattgataagccaacaaaagatcaa
tatgtagaaccaaagaagaaagttcatgatcctcaggggagatttcttcagcaatggaac
aaagtatttgtattggtttgtataattgcgttgtcactcgatccgttgttcttctacatt
cctgtcatagatagcgacaaaaagtgcctcgatttggacaggacgttaaagatcaccgct
tgtgttcttcgttctatcactgatattttctatatctttcacattatcttgcaatttcgt
actggctacattgctcctccttctcgaatttttggaagaggtgagttggttgaagattcc
tatgatatagccaagcgatatttgttatcatatttcatcgttgacgttgtagcagtcctt
ccactcccacagattgtgatattggtaatcactcccaacgcgaatggctctattgctctg
gcgacgaaagaaatgttgaagattgtcatttttgctcaatattttccaagaatttttaga
atttatccattgtacaaagaagtaacaaggacttcaggcttgtttactgaaagtgcatgg
ggtggagctgttttcaacctttccctctacatgctagccagtaacgtaattggagccttt
tggtacttgttctcagtagaacgccaagatacatgctggcgcgatgcgtgtgtcaagatc
tccggctgttcatcaaactacttatattgtgacaaaagttcgattggaaatgcttcctta
ctgaattcttcttgccctctcgtgaaacaagaagatataaaggatccaaatgtctttgat
tttggaatagctcttgatgctcttcagtttcggattgtggagaaaaggaacttctggacc
aaactcttctattgcttttggtgggggctgagaaacttaagttctcttggccaaaacttg
aagacaagcactttcgttggagagattctctttgcggtcttcatctcaattatcgggctt
atcttgttttccttgcttattggcaatatgcagaaatatttgcaatctatcacggttaga
gtagaagagatgagagtgagaaggcgggatgcagaacagtggatgtctcatcgcatgctt
cccgacattctgaaagagcgaattagacgacatgaacagtacaaatggcaagaaaccagg
ggagttgaggaagatttactgcttcaagatcttcctagagacttgagaagagatttaaag
cgccatctctgttggtcttttctcaaaaaagttcccatatttgagaaaatggatgaccaa
ttactggacgcgttgtgtgacagactgaaaccagcactcttcacagataagagcttcata
atccgagaaggagatccagtagaagaaatgctctttctaatgagaggtacactgttaact
atgaccacaaatggtggaaggactggttttttcaactctgtttatctcaaggctggtggc
ttctgtggagatgagcttttaacatgggctttagaccccaatacttcttccggtagtctt
ccactttcaaccagaacagtacaggctgtaactgatatagaagcttttgccgtcactgct
gatgacctcaagtttgtcgccgcacagtttagacgtctaaatagcaagcagattcagcat
actttcaagttctgctcacagcagtggaggacatggggtgcatgctttatacaagtagca
tggcgtcgatactgcaggaataagctcgagaaagctttaagagtggaagaagatagactg
caggctgcattagcaaaagagagctcaaatacaccaagtcttggagctaccatttatgca
tcaaggtttgctgctaatgctctacgcgccttgcgacgtaagcacgcaactggtgcaaaa
ttatctcccacattacctctgctgcttcataagccatctgaaccagacttcagtgaggaa
aatgattcatga
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