Solanum pennellii: 107019828
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Entry
107019828 CDS
T04130
Name
(RefSeq) alpha-amylase 3, chloroplastic
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
spen
Solanum pennellii
Pathway
spen00500
Starch and sucrose metabolism
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107019828
Enzymes [BR:
spen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
107019828
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
RSS_P20
Motif
Other DBs
NCBI-GeneID:
107019828
NCBI-ProteinID:
XP_015075683
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Position
5:1800732..1812925
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AA seq
892 aa
AA seq
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MSTVTIEPLVGHYLRRSPKLYPNQKKTSHFSLNYSRRPLSGTATLRFCDYRRRRTVPIRA
SSTDAVVIETSEQSDVVFKETFSLKRPERAEGKISIRLDKGKDEENWNLTVGCSLPGKWI
LHWGVHYTDDTGSEWDQPPPEMRPSGSIAIKDYAIETPLQGDTFQEVKIDISSKWSIAAI
NFVLKDEETGVWYQHRGRDFKIPLVDCLDDDANIVGVKKESNIWSGSLGKLSNILLNPEA
SPSKGESSSNEGSSAKNRRLEGFYEEHAIVKETLVDNIVNVSVKQCPETAKNILCVDTDL
PGNVILHWGIYKGDAKIWELPAMPYPAETVVFKNKALRTLLQRKEGGNGSSGLFTLDVGL
AGFVFVVKLDENTWLNCKGDDFYVPLSSGTLHLEESKQSEESNSSQIVNRTPEESQIGSV
YTDEIIKEIRSLVSDISSEKSRKTKNRETQETILQEIEKLAAEAYGIFRSSIPTILETVV
SESELVQPDVKVTSGTGTGFEILCQGFNWESHKSGRWYKELHDKAAELSSLGFSVIWLPP
PTDSVSPEGYMPRDLYNLNSRYGSFDELKVTVKKFHEVGIKVLGDVVLNHRCASERNQNG
IWNIFGGRLNWDERAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDIREWLLWLR
EEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEFWDSLVYTYGEMDHNQDAHRQRII
DWINATNGTAGAFDVTTKGILHSAIERCEYWRLSDQKGKPPGVVGWWPSRAVTFIENHDT
GSTQGHWRFPGGKEMQGYAYILTHPGTPSVFFDHIFSGYRSEIGNLISLRKRNKINCRSL
VDITKAERDVYAAVIDDKLAVKIGPGHYEPPSGHQRWKMAAEGNNYKVWELS
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagttactatagagcctctcgtcggccattatctccggcgaagcccaaagcta
tatccaaatcagaagaaaacctctcatttttctctaaattactccaggaggccactctcc
ggtaccgcaactttgagattctgcgattatcggcgtcgccggacggtacctatcagggct
agttccaccgatgctgtcgtcattgagacgtcggagcagtcggacgtagtttttaaggag
actttctcgttgaaacgaccggaaagggctgaaggaaagatatccatcagattggataag
gggaaggatgaagagaattggaacctcactgtgggatgtagtttgccagggaaatggatc
cttcactggggggtccattatacagatgacactggcagtgaatgggatcaacctcctcca
gagatgcggccgtcaggttcaattgccataaaggattatgcaattgaaactcctttgcaa
ggagacacatttcaagaggtgaagatcgacataagttctaagtggtctatagcagctata
aattttgtgttgaaggatgaggaaactggagtttggtatcagcacagagggcgggacttc
aagattcctcttgttgactgccttgacgatgatgctaatatcgttggtgttaaaaaggag
tcgaacatatggtcaggatcactaggaaagctgtccaacatactccttaatccagaagct
tctccttctaaaggggaatcaagcagcaatgaggggtctagtgcgaaaaacaggcgtctt
gaagggttctatgaggagcatgccatagtaaaagagactcttgtcgataacatagttaat
gtctctgttaagcagtgtccagagactgctaagaatattttgtgtgtagataccgactta
cctggaaatgtaattcttcactggggaatctacaaaggtgatgctaaaatatgggaacta
cctgcaatgccatatccagcggaaacagtagtgttcaagaataaggcactgcggactttg
ctgcagagaaaagagggaggcaatggttcttcgggactgtttactttggatgtaggactt
gccggatttgtttttgtggtgaagctagatgaaaatacgtggttgaattgtaagggagat
gacttttatgtacctctgtcaagtggcacattacatttggaggaaagtaaacaaagcgag
gagtcaaattcttcccagatagtcaatcgtacgcctgaggagagccaaatagggtctgtg
tatactgatgaaataataaaagagataaggagtttggtgagtgacatttcttctgaaaag
agccgaaagacaaaaaatagggaaacacaggaaaccattcttcaagaaattgagaagctg
gctgctgaagcttatggtatattcagaagttcaatcccaacaatactagaaactgttgtt
tctgaatctgagcttgtacaacctgacgtgaaagtaacttcaggaactggtacaggattt
gaaattttgtgccagggttttaattgggaatctcataaatccggaagatggtacaaggag
ctgcatgataaagctgcagagttatcttcacttggtttcagtgtgatctggttgcctcca
ccaactgactcagtgtcaccagagggatacatgcctagggatttatataacttaaattcc
agatatggtagttttgatgaattgaaagttacagtaaagaaattccatgaagtgggcatc
aaggttcttggtgatgttgtcttaaatcatagatgtgcaagtgaacggaatcaaaatggt
atatggaatatctttggtggtcggttaaattgggatgagcgtgcagttgttgcagatgat
ccacatttccagggaaggggcaacaaaagtagtggagataatttccatgctgctcctaac
attgatcattcccaggaattcgtgagaaaggatatcagggaatggttactctggctgagg
gaggagattggttatgatggatggaggcttgattttgttcgtgggttttggggtggttat
gtgaaggattacttggaagcaactgaaccttacttcgctgtaggcgagttttgggattcc
ctcgtttatacttatggagagatggatcacaatcaagatgcgcataggcagagaattatt
gactggattaatgctactaatggaactgcaggagcatttgatgtgacaacgaagggaatt
cttcattctgcaattgagagatgtgaatactggcgactatccgatcagaaggggaaacct
cccggcgttgttggatggtggccatctcgtgctgttacatttatagagaatcatgataca
ggttctacacagggtcattggagatttcctggtgggaaagagatgcaaggttatgcctat
atcctgactcaccctggaaccccgtcagtcttctttgatcacattttctctggttaccga
tctgaaataggaaatcttatatcactcagaaagcggaacaagattaactgtcggagtttg
gtggatataacaaaagccgaaagggatgtttacgcagcagttattgatgataagctggct
gtcaaaataggaccaggccactacgagcctccaagtgggcatcagagatggaaaatggct
gctgagggtaacaattataaggtttgggaattgtcatga
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