Solanum pennellii: 107020358
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Entry
107020358 CDS
T04130
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107020358
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107020358
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107020358
03036 Chromosome and associated proteins [BR:
spen03036
]
107020358
Protein phosphatases and associated proteins [BR:
spen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107020358
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107020358
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107020358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
Adaptin_N
SCD
Cnd1
CLASP_N
Motif
Other DBs
NCBI-GeneID:
107020358
NCBI-ProteinID:
XP_015076173
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Position
5:4226408..4233701
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AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDWFVPLVKRLAAGEWFTARVSACGLFHIAYSSAPEMLKAELRSIYSQLCQDDMPMVR
RSAATNLGKFAATVESAYLKSDIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGIGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LDMTTSPHYLYRMTILRSISLLAPVMGSEITCSKLLPVVVTATKDRVPNIKFNVAKVLQS
LIPIVDNSVVEKTIRPSLVELAEDPDVDVRFYANQALQSIDNVMMSG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtagatgagccattgtacccgatagctgtgttaatagatgaacttaagaat
gatgatatccaattgcggttgaattctattaggaggttatcaactattgcgcgtgcactc
ggcgaggaaagaaccagaaaggagttgatcccttttttgagtgaaaacaatgacgacgat
gatgaagtgttgctggcaatggcagaagagttgggcgtgtttattccttatgttggaggt
gtggagcatgctcatgttcttctcccacctctagagaccctttgtacagttgaggagacc
tgtgtgagggataaagctgtggagtcattgtgtagaattggatcccagatgagggagagt
gatttagttgattggttcgtcccacttgtgaagaggctagcagctggtgaatggttcaca
gcaagggtttctgcatgtgggctctttcatattgcttactcaagtgccccagaaatgttg
aaagcagagcttcggtctatttacagccaattgtgtcaagatgacatgcctatggtgcga
aggtcggctgctacaaacttggggaagtttgctgctacagttgaatctgcttacctgaag
agtgacatcatgtcaatatttgatgatcttacccaggatgatcaggattctgtgcgctta
ttagctgttgagggctgtgccgcacttggcaagctgttggagccccaggactgtgtagca
catatcctgcctgtcattgtcaacttctctcaggacaagtcttggcgcgttcgatacatg
gttgctaaccagctgtacgaactatgtgaagctgtagggccagagcccactaggacggat
ttggtgcctgcctatgtccgtttgcttcgagataatgaagctgaagttcgcatagctgct
gcaggaaaagtaaccaaattctgcagaattcttagtcccgagcttgcgattcagcatatt
cttccctgtgtgaaggaattatcatcagactcttcacaacatgtcagatctgctttggct
tccgttataatggggatggctcctgttttgggaaaggatgcaaccattgaacatcttctt
ccaatatttctttcccttctgaaggatgagtttcccgatgtgcgcctgaacatcattagc
aagcttgatcaagtcaatcaggtgattggaattgatttattgtcccaatctctgttgcca
gctattgttgagctggcagaggacaggcattggcgagtccgtcttgcaataatagaatac
atacctctattggcaagtcaattgggcataggattttttgatgataagctgggtgctctt
tgcatgcaatggttacaggacaaggtttattcaattagagatgctgctgctaataacttg
aagcgtcttgcagaagaatttggtccagagtgggcaatgcagcatataattcctcaggtc
ttggatatgactaccagtccacattatttgtatcgaatgactattcttagatcaatttca
ttgcttgcaccagtaatgggctctgagataacttgttctaagttgctacctgtggttgtt
actgctacaaaggatagagtgcccaacattaaatttaatgtggcaaaggtgttgcaatcc
cttatacctattgttgacaactcggtggtagagaaaaccattcggcccagtttagtagag
ctagccgaagaccctgatgtcgatgttcgcttttatgccaatcaagcactccagtctatc
gataatgtcatgatgtcaggttag
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