Solanum pennellii: 107020397
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Entry
107020397 CDS
T04130
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107020397
Enzymes [BR:
spen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
107020397
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107020397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_1
Kelch_3
Kelch_4
Kelch_5
Kelch_6
Kelch_2
MTS
Flavi_NS1
DNA_methylase
PrmA
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
107020397
NCBI-ProteinID:
XP_015076228
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Position
5:complement(77239547..77246384)
Genome browser
AA seq
1038 aa
AA seq
DB search
MEFEKRKLAALSSMNSPEPDKSPKGNIDAPIIPLLNTLNSHPSYFTTSSCSGRISILSQP
INPITNPTKKKAKGGKWVFISHDPIEPHLILSHIFPSKSIQPVKSVTDVADLHSLVFRFE
PLIIAVECKDIEAAQFLVSLAISSGFRESGITSVNKRVIIAIRCSIRLEVPLGDTEKIMV
SSEYVKYLVELANEKMEVNRKRTDNFLDILLKNGFLGSQISNGEVDCDDSDLLENSLVNG
VSGNGNAKRRDFDDSYSGSEVAPDINLHTVKLVISGESIERLFLWGHSASTIDDVDKKKV
LIFGGFGGMGRHARRCDLLLLDLECGRMEMIDVLDAPCPRVGHTSSMIGDAMYVIGGRAD
PSNILNDVWVFNVTKKNWRLLECSGTPFLPRHRHAAAAVGSRIYVFGGIHNDMIFSSLYV
FDTQNIEWSEIQVQGDLPSARHSHSMAAYGTQIFVFGGYDGQKALGDLYSFDVKTCVWKK
ENMIGRPPSAKFSHSMFIYKKYLGIIGGCPVSQHNQRLSFFNLESHGWKHISISSIGEGL
FVRCTANIVDTDLIMIGGGAACYAFGTKFSAPVKINLLPLISLIESSIHLHEENMHAICQ
EEKIMGEMNVSFCSPQNAVEAVTNGSFHQNSEGIDSGIARSQMVASHWVLRLKKKDAKMA
KDMLKKLGWLDLGRKAHSQEDGKDICFPITENFRALFNQRNNLEGVSESVCQSEKDTCMI
ALNILIECGATILADEIVKVKKASHSPFKVMKEAVGSLLSDRGLPLQLLEELPSRWERLG
DIVVLPLTSFKDSAWDLIGQELWFIVAKSLGAIRLARQGRVAPTGTRDSTLEILVGDNGW
VNHRENGILYSFDATKCMFSWGNLSEKLRMGHFDCKDEVIVDLFAGIGYFVLPFLVRAKA
RLVYACEWNPHAVEALRHNLEANLVADRCVLLEGDNRITAPKGVADRVCLGLIPTSEGSW
LTAVRALRDEGGILHIHGNVKDSEEHIWTNYVSQSIQEIARSEGHDWDVTVEHVERVKWY
APHIRHLVADVRCKMIQT
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgagaagagaaagttagcagctttatcttccatgaattcaccagaaccagat
aaatcaccaaaaggcaacatagacgcaccaattatccctttactcaacactcttaactca
catccttcgtatttcactaccagttcttgttctggccgtatctccattctttcacaacct
atcaaccccataaccaatcccaccaaaaaaaaagctaaaggaggcaaatgggtcttcatt
tctcacgacccaattgaaccccatttgattttatcgcatatttttccatctaaatcaatt
caaccagtaaaaagtgttactgacgttgctgatttacatagccttgtgttcagatttgaa
cctttgattatcgcagtggagtgtaaggatattgaggcagctcaatttttggtttcttta
gctatttcgtcggggtttagggagagtggtattactagtgttaataaaagagtgattatt
gctatacgatgttcgatacgattggaagtgccattaggggatactgagaagataatggtg
tcttctgagtatgttaagtatcttgttgagttagcaaatgagaagatggaggttaataga
aaaagaactgataatttccttgatatattgttgaaaaatgggtttttgggttcacagatt
agtaatggagaagtggactgtgatgattctgatttgttggaaaattctttggttaatggt
gttagtggaaatggaaatgctaaaaggagagactttgatgattcttattccggatcagaa
gtagcccctgatatcaacctacacactgttaaattggtgatttctggtgaatcaattgaa
aggctatttctctggggtcactctgcttctaccattgatgatgtagataaaaagaaggtt
ctcatatttggtggctttggaggaatgggtaggcatgcacgaagatgtgatctattgctt
cttgatctagaatgtggaaggatggagatgattgatgttttggatgccccatgtccacgc
gtgggacatacatcatccatgattggagatgcaatgtatgtgattggaggaagagctgac
ccttcaaatattctgaacgatgtgtgggttttcaacgtgacaaaaaagaattggaggctg
ttagagtgttcaggcactccattcctcccaaggcatagacatgctgcagctgctgtaggt
tcaagaatttatgtatttgggggaattcacaatgatatgatattctcatcactgtatgtc
ttcgacacacaaaacattgaatggagcgaaatacaagttcaaggggatttgccatctgca
cgccattctcattcaatggcagcatatgggactcaaatatttgtatttgggggatatgat
gggcagaaggctctaggggacctgtatagttttgacgtgaaaacatgtgtatggaagaag
gaaaatatgattggtagaccaccatcagcaaaattttcccattctatgtttatttataag
aaatacctcgggattattggagggtgtcctgttagtcaacataatcagagattatcattt
ttcaatctggaatctcatgggtggaagcatatttctatcagttcgattggtgaaggcctg
tttgttcgttgtacagcaaatattgttgatactgacctaatcatgattggtggtggggca
gcctgttatgcatttggaacaaagttcagtgcaccagtgaaaataaatctgttacctttg
atatcattaatagaaagttccatccatttacatgaagaaaatatgcatgccatttgccaa
gaagaaaaaataatgggagaaatgaacgtttccttttgttccccacagaatgcagtggaa
gcagtaacaaatggaagctttcatcagaattcagagggtatagattctggaattgctaga
agtcagatggttgcttcccattgggttcttcggctcaaaaagaaagatgccaaaatggca
aaggatatgttgaaaaaactcggatggttagatctcgggagaaaagcccattcgcaggaa
gatggaaaagatatttgtttccccattacagaaaattttcgtgcgttattcaaccagaga
aacaatctggaaggtgtttccgaatctgtttgtcaatcagagaaagatacctgcatgata
gccttgaacattctgattgaatgtggagcaactatactagctgatgaaatcgtcaaagtt
aaaaaggcttcacattctccattcaaagtgatgaaggaagctgtaggctctttgctaagt
gaccgaggcctgccattgcaacttctagaggagttaccttcaagatgggaacgacttggt
gatattgtcgtgcttcctttaacatccttcaaggattcagcatgggacttgattggacaa
gagctttggtttatcgtcgcaaaatccctgggggctattcgccttgctcgacaagggcga
gttgcaccaactggtacacgggacagtactttagagatacttgttggagataatggttgg
gtcaaccaccgagaaaatggaattctttattcttttgatgctactaagtgcatgttttca
tggggtaatctctctgagaagcttcggatgggccactttgactgcaaagacgaagttata
gtagatttatttgctggcattggatattttgtgctgcccttcctagtgagggccaaagcc
aggcttgtgtatgcttgtgaatggaatccgcatgcagttgaggcacttcgtcataatctt
gaagctaatcttgttgctgaccgctgtgtattactcgaaggagataatcgaattacagcg
ccaaaaggtgtagctgatagagtgtgtctcggtctcattcctacaagcgagggtagttgg
cttaccgctgtcagagcattaagagacgagggaggtatattgcacatccatggcaatgtc
aaagattccgaagaacatatctggacaaactatgtttcccagtcaatccaagaaattgct
agatctgaaggtcatgactgggacgtaacagtagaacatgtcgagagagtgaaatggtac
gcgcctcatattcgccatcttgttgcagatgtgagatgcaaaatgattcagacataa
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