Solanum pennellii: 107021896
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Entry
107021896 CDS
T04130
Name
(RefSeq) long chain base biosynthesis protein 2a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
spen
Solanum pennellii
Pathway
spen00600
Sphingolipid metabolism
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107021896
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spen01007
]
107021896
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
107021896
Amino acid related enzymes [BR:
spen01007
]
Aminotransferase (transaminase)
Class II
107021896
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
107021896
NCBI-ProteinID:
XP_015078094
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Position
6:complement(55306738..55311118)
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AA seq
489 aa
AA seq
DB search
MINIPYLTALSTYFSYGLLFAFGQFRDFFRKIFDWWNASNLQGYAPICLGLEDFYIRRLY
LRIQDCFGRPICSPPDAWFDVVERVSNDNNKTLNRTTKVSRCLNLGSYNYLGFASSDEYC
TPRVIESLKTFSASTCSTRVDGGTTTLHSELEVCVANFVGKPAAIVFGMGYVTNSAILPV
LIGKGGLIISDSLNHNSIVNGARGSGSTIRVFQHNTPSHLEKVLREHIAEGQPRTHRPWK
KIIVVVEGIYSMEGELCQLPEIVAICKKYKAYVYLDEAHSIGAVGRTGRGVCELLGVDAA
DVEIMMGTFTKSFGSCGGYIAGSKELIEYLKYTCPAHLYATSISPPAAQQIISSINVILG
EDGSSRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLK
RKVAVVTVAFPATPLLLARARICISAAHSRDDLIKALEVISEVGDLVGIKYFPVEPNKEQ
LEANRVKLE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatattccatacttgactgccttgtccacctatttcagctatggcttgctcttt
gcctttggccaatttcgtgatttcttcagaaaaatattcgattggtggaacgccagtaat
cttcagggatatgcacctatctgcttaggactagaagatttctatattcgtcggttgtat
cttcgcattcaggactgttttggaaggccaatatgcagtcctcctgatgcttggtttgac
gtggtagagcgtgtatccaatgataataacaagacactaaatcggaccacaaaagtttca
aggtgcctgaacttgggatcatataattaccttggttttgcttcttctgatgaatattgt
accccgcgtgttattgagtctttgaaaacattttccgcaagcacatgcagtacccgtgtt
gatggaggcaccacaacgttacatagtgaattggaagtgtgtgtggctaattttgttgga
aaaccagctgctattgtttttggtatgggttatgtaacaaattcagctattcttcctgtc
ttgattggaaagggaggtttgatcatcagtgattctctgaaccacaactctattgtaaat
ggtgctcgaggttctggatccaccattcgtgtttttcaacataacacaccatcacacttg
gagaaagtcttgagagaacatattgctgagggacaacccagaacccacagaccatggaag
aagataatcgttgtggtcgagggtatatatagtatggaaggggagctttgccaactccca
gagattgttgcgatatgcaagaagtacaaggcatatgtgtatctggatgaggctcatagc
attggagcagttggaagaactggaaggggggtctgtgagctcttaggagttgatgctgca
gatgtggagattatgatgggaacttttacaaagtcatttggatcatgtgggggttatatt
gcaggatcaaaggaacttattgaatatctgaagtacacttgcccagctcatctttacgcc
acatcaatatcacctccagctgcccaacaaataatttcttctatcaatgttatacttggt
gaagatggttctagtagaggggctcagaagctagcacagatacgtgaaaatagcaacttt
ttccgctctgaattacagaagatgggctttgaggttctgggggacaatgattctccagtc
atgcccattatgctctacaatccagcaaaaatacctgctttttcacgggagtgtctcaaa
cgaaaagtggcagtagtgacagttgcttttccagctactcctttactactggccagagca
cgaatttgcatatctgctgctcactcaagggatgatcttattaaagcgctcgaggttatc
agcgaagttggtgacctagtgggcattaaatacttccctgtcgagcccaacaaagagcag
ctagaagcaaaccgagtcaagctggaatga
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