Solanum pennellii: 107023139
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Entry
107023139 CDS
T04130
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
spen
Solanum pennellii
Pathway
spen04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107023139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spen04040
]
107023139
Ion channels [BR:
spen04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107023139
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
107023139
NCBI-ProteinID:
XP_015079208
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Position
6:45077365..45082841
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AA seq
708 aa
AA seq
DB search
MNHRQEEFSRFHGWKSEKNSEGNFHDKDGVHRTKVVIASNELHKGLEPGKWRAKSIIQAV
KSSLSGFVEESLGSNKNILDPQGPFLQKWNKIFVLSCVIAISLDPLFLYIPLIDNDNKCL
GIDRTLEVTASVLRSFTDIFYFLHIALQFRTGFIAPSSRVFGRGVLVEDAWEIAKRYLST
YFLIDILAVLPLPQVVILIIIPKLRGARSLNTKNLLKSVVFFQYIPRVLRVYPLYKEVTR
TSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWKQACANSSACRHASFYC
DDNHTGFKTLLNISCPIETPNTTLFDFGMFLDALQSDVVGSMNFPQKFFYCFWWGLQNLS
SLGQNLQTSTYVWEICFAVFISISGLVLFAFLIGNMQTCLQSSTMRLEEMRVKRRDAEQW
MSHRLLPENLRERIRRYEQYKWQETRGVEEENLIHNLPKDLRRDIKRHLCLALLMRVPMF
EKMDEQLLDALCDRLKPVLYTENSYIVREGDPVNEMLFVMRGKLQSVTTNGGRTGFFNSE
YLKAGDFCGEELLTWALDPHSSTNLPISTRTAQALSEVEAFALVADDLKFVASQFRRLHS
KQLRHTFRFYSGHWRTWAACFLQAAWRNYCRKKVEESLRVEESRLQDALAKEGSSSPSFG
ATIYASRFAANALRALRRNKANKARVPDRISPILLQKPTEPDFTAEDK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccgacaagaggagttctcgagatttcacggttggaaatcagagaaaaactct
gaaggaaattttcatgataaggatggagtgcaccgaactaaagttgtaatagcttccaat
gaattacataaaggcttggaacctggtaaatggagggccaaaagcataattcaagccgta
aaatccagtttaagtggttttgtggaagaaagcttgggatccaacaagaacatacttgat
cctcaaggaccttttcttcagaagtggaacaaaatatttgtattatcgtgtgtaattgcc
atctccttggatcctttgttcctttacattccattgattgataatgacaacaaatgcctg
gggatagacagaacattggaggttacagctagtgttttgcgttcttttactgatatattt
tactttcttcatattgcccttcaatttcgaactggttttattgctccttcttcacgtgta
tttggaagaggcgttttagttgaagatgcttgggagatagcaaagagatacttgtccacg
tacttcttgattgatattctcgcagttctaccactaccgcaggttgtaattttaattata
atccctaagttgcggggtgcaagatccctgaataccaagaatttgctgaagtctgttgtc
tttttccaatatattccaagggtccttcgagtttatcctttatataaggaagtcacaaga
acatctggcatactcactgaaacagcatgggctggagctgctttcaatctattcctttat
atgcttgccagccatgtacttggagccttttggtatctgttctctatagaacgtgaaact
acttgctggaaacaagcttgtgcaaattcctctgcctgtcgtcatgcctcgttttattgt
gatgataatcatacaggatttaaaacgttgctgaatatttcctgtcctatagagacacca
aacacaacgctctttgattttgggatgttccttgacgctctccaatcagatgttgtagga
tcaatgaattttccacagaagttcttttattgtttctggtggggtttacagaacttaagt
tcccttggtcaaaatctccaaacaagtacctacgtatgggaaatttgctttgcagttttc
atttccatctccggcctggtgctatttgcctttctcattggaaatatgcagacatgtctg
cagtcctcaacaatgagactagaggagatgagggtgaaaaggcgagacgcagaacagtgg
atgtcacatcggttactccctgagaacctcagagagcgaattaggcgctatgagcaatat
aagtggcaagaaacaaggggtgttgaggaagaaaatctgattcacaaccttcccaaagat
ctcagaagagatataaagcgccatctttgtttagctttactcatgagagtgccaatgttt
gaaaaaatggatgaacaactcttggatgcactatgtgaccgactcaagccagtgctctac
accgagaacagctacatcgttcgtgaaggtgacccagttaatgagatgctgtttgtaatg
aggggcaaactacagtctgtaaccactaatggagggaggacaggttttttcaactcagag
tatctaaaagctggtgatttttgtggagaggagcttcttacttgggctctagaccctcat
tcatcaactaacttacctatctcaacccgaactgcacaagcactctcagaagttgaagca
tttgctttagtggctgatgatttgaagtttgtggcctctcagtttcgaagacttcacagt
aagcagctccgccatactttcaggttttactcaggtcattggagaacttgggcagcttgc
tttttacaagcagcatggcgcaattattgcaggaagaaggtagaagagtctcttcgtgta
gaagaaagcagattgcaagatgcattagcaaaggaaggttccagttcaccaagttttggt
gctaccatctatgcatcaagatttgctgctaatgcacttcgcgctctgcgacgaaataaa
gcaaataaagcaagagtgccagacaggatatcacccattctgcttcagaaaccaacagag
ccagattttactgctgaagataaataa
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