Sphingobium sp. EP60837: EP837_00399
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Entry
EP837_00399 CDS
T04432
Symbol
yarS
Name
(GenBank) Tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EP837_00399 (yarS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphb01007
]
EP837_00399 (yarS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphb03016
]
EP837_00399 (yarS)
03029 Mitochondrial biogenesis [BR:
sphb03029
]
EP837_00399 (yarS)
Enzymes [BR:
sphb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
EP837_00399 (yarS)
Amino acid related enzymes [BR:
sphb01007
]
Aminoacyl-tRNA synthetase
Class I (A)
EP837_00399 (yarS)
Transfer RNA biogenesis [BR:
sphb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
EP837_00399 (yarS)
Prokaryotic type
EP837_00399 (yarS)
Mitochondrial biogenesis [BR:
sphb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
EP837_00399 (yarS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
S4_2
PS_pyruv_trans
DUF3859
Motif
Other DBs
NCBI-ProteinID:
ANI76845
UniProt:
A0A173KU39
LinkDB
All DBs
Position
1:431734..432951
Genome browser
AA seq
405 aa
AA seq
DB search
MTNYQSDLLRLLETRGYIHQLTDAEGLDALAAKQIVPGYIGFDPTAPSLHVGHLVSIMML
RLLQKAGHKPIVLMGGGTGKIGDPSFKDEARKLLTTDLIAENVASIKRVFERFLTFGDGP
TDAIMLDNAEWLDRLEYIPFLRDIGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ
AYDFLELSRRSACRLQMGGSDQWGNIVNGVELARRVDGTQVFGLTTPLLTNADGTKMGKT
VGGAVWLNEDQLSNYDYWQFWRNTADADVANRLRLFTDLPMDEVERLAALHGAEINEAKK
ILANEATALCRGPEAATLAAETARKTFEEGASDANLPTISLGADGLNIVQGTTALGFAAS
NKEVRRKLAEGAIRVNGEVVSDPALTLKPGDKLSFGAKKHGLVTA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattaccagtccgatctgctccgtctactcgaaacgcgcggctacatccatcag
ctgaccgatgcggaggggctcgatgccctggccgccaagcagatcgtgccgggctatatc
ggttttgatcccacagcgccttcgctgcatgtcgggcatctggtgtctatcatgatgctg
cggctactgcagaaggcaggacacaagccgatcgtcctgatgggcggcggcaccggaaag
attggcgatccgagcttcaaggacgaagcgcgcaaactgctgaccaccgacctgatcgcg
gagaatgtcgcgagcatcaagcgcgtgttcgagcggttcctgacctttggagacgggccg
accgacgcgatcatgcttgataatgcggagtggctcgaccgcctggaatatatccctttc
ctgcgggacatcggccagcatttctcggtcaaccggatgctaagcttcgattcggtgaag
ctgcggctggaccgggaacagtcgctgagcttcctcgagttcaattacatgatcctccag
gcctatgactttctggagctttcgcgacggtcggcttgccggttgcagatgggcggatcg
gatcagtggggcaatatcgtcaatggcgtcgaactggcgcggcgggttgatggcacgcag
gtatttggcctcaccaccccgctgctgaccaacgcggacggcaccaagatgggcaagacc
gtgggcggtgcggtgtggctgaacgaagatcagctttccaactacgactattggcagttc
tggcggaacacggcggatgccgacgtggcgaaccgcctgcggctgttcaccgatctgccg
atggacgaggtggagcggcttgctgcgttgcacggcgcggagattaacgaggcgaagaag
atcctggccaatgaggcgacggcgctttgccgtggccccgaggctgctactctggcggcc
gagacggcacgtaagacgttcgaggaaggcgcttccgacgccaacctgccgaccatcagc
cttggcgccgacgggctcaacatcgttcagggcacaaccgcgctcggctttgcggcatcc
aacaaggaagtgcggcgcaaacttgccgaaggcgcgattcgcgtgaatggcgaagtggtg
agcgaccccgccctgacgctgaagcccggtgacaagctgagcttcggcgcaaagaaacat
gggttagtaactgcttga
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