Sphingobium sp. EP60837: EP837_00680
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Entry
EP837_00680 CDS
T04432
Symbol
ogdH
Name
(GenBank) Oxoglutarate dehydrogenase (succinyl-transferring)
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb00020
Citrate cycle (TCA cycle)
sphb00785
Lipoic acid metabolism
sphb01100
Metabolic pathways
sphb01110
Biosynthesis of secondary metabolites
sphb01120
Microbial metabolism in diverse environments
sphb01200
Carbon metabolism
sphb01210
2-Oxocarboxylic acid metabolism
Module
sphb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EP837_00680 (ogdH)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EP837_00680 (ogdH)
Enzymes [BR:
sphb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
EP837_00680 (ogdH)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
ANI77119
UniProt:
A0A173KSL7
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All DBs
Position
1:complement(714493..717288)
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AA seq
931 aa
AA seq
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MGYENQDFETERGPSWARPNWPLTDTDDLTGALDPTQMQVAVKAAAKASGKAVSDADAVS
AADDAIRAQLLIRTYRVRGHLAANLDPLGLTHRELPADLTPEYHGLTDLEKKIYLGGTLG
LQYATVREIVAILRANYCGNVGLEYMHIADVEERVFLQDRLEGKDKEIHFTPEGKKAILS
KVIQGEQYEKFLGRKYVGTKRFGLDGGESMIPALEAIIKHGGALGVREIVYGMAHRGRLN
VLANVMAKGFRVIFHEFSGGTANPEDVGGSGDVKYHLGTSTDREFDGIKVHMSLVPNPSH
LETVDPVVLGKVRAQQTFRDDLGKHEQVLPVLIHGDAAFAGQGIVWECLGFSGVSGYNTG
GCIHFIVNNQIGFTTSPQFSRGSPYPSDVAKGVQAPILHVNGDDPEAVTFACKLAIEYRQ
TFHRDIVIDMWCYRRFGHNEGDEPSFTQPQMYAKIRQHPPVSDVYSARLKAEGVVDDDFV
NKVTGDFVNQLEEEFEAAKSYKANKADWFAGRWSGLHKPADAETARQNVESAISQKLFDS
LGKTLTTVPEGLNVHKTLKRVIEAKAEMFKNGVNFDWATGEALAFGSLLSEGYGVRLSGQ
DSGRGTFSQRHAVWIDQDSENKYIPLSTVPHGRFEVLDSPLSEYGVLGFEYGFALADPKS
LVLWEAQFGDFANGAQIVFDQYIASSETKWLRSNGLVCLLPHGYEGQGPEHSSARLERFL
QLCAEGNIQVANITTPANYFHVLRRQMLRPFRKPLIIMAPKSLLRHKLAVSKAEDFLGET
HFKRILSDPNGAADADTRRLVLCSGKVFYDLLEARDAAGDTDVQIVRIEQIYPFATEALA
TRIKRMTSLEDVVWCQEEPRNNGAWFFVEPYVEEALAQAGKAPMRARYAGRKAAASPATG
LAKRHVAEQGALVADALGHSVREEIRRQKKG
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgggttacgaaaaccaggattttgagacggagcgcgggcctagctgggcgcgcccgaac
tggccgctgacggacacggatgatctgaccggcgcgcttgacccgacgcagatgcaggtg
gcggtgaaggccgccgccaaggcatcgggcaaggcggtgtcagatgcggacgcggtcagc
gcggctgacgatgctatccgggcgcagctgctgatccgcacttatcgcgtgcgtggccac
ctggcggctaatctcgatcccctggggctgacccatcgtgaacttccggccgacctgacg
cccgaatatcacggccttaccgacttagagaagaagatctatctcggcggtacgctgggc
ctgcaatatgcgaccgtgcgcgaaatcgttgccatcctgcgcgccaattattgcggcaat
gttggcctggaatatatgcacatcgccgatgtcgaggaacgcgtgttcctccaggaccgg
ctggaaggcaaggacaaggagatccacttcacgcctgagggcaagaaggcgatcctgtcg
aaggtgattcagggcgagcagtacgaaaaattcctgggccgcaaatatgtcggcaccaag
cgtttcggcctggatggcggcgagtccatgattcccgcgctcgaagcgatcatcaaacat
ggcggcgcgctgggcgtgcgcgagattgtttacggcatggcccatcggggccgcctgaac
gtgctcgccaatgtgatggccaagggcttccgcgtcatcttccatgaattttccggtggt
acggccaatcccgaggatgttggtggttcgggcgacgtcaaatatcacctcggcacatcg
accgaccgtgagttcgacggcatcaaggtgcatatgtcgctggtgcccaacccgtcgcac
ttggaaacggtcgatccggtggttctgggcaaggtccgtgcgcagcagaccttccgtgac
gacttgggcaagcatgagcaggttctgcccgtgctgatccacggcgacgctgctttcgcc
gggcagggcatcgtttgggaatgcctgggcttttcgggggtttccggctacaataccggc
ggctgcatccacttcatcgtcaacaaccagatcggctttacgacctcgccccaattttcg
cgcggatctccctatccgagcgacgtggcgaagggcgtccaggcgccgatcctgcacgtc
aatggcgacgatccggaagctgtgaccttcgcatgcaagctggcaatcgaatatcgccag
accttccatcgcgacatcgtgatcgacatgtggtgctatcgccgcttcggtcacaatgaa
ggcgacgagccgagcttcacccaaccgcagatgtacgcgaagatccgccagcatcctccc
gtcagcgatgtctattcggctcggctgaaggcggaaggcgtggttgatgatgatttcgtc
aacaaggtaacgggcgatttcgtcaaccagcttgaggaagagttcgaagcggcaaagagc
tacaaggccaataaggctgactggttcgcgggtcgctggtcgggcctgcacaagcccgcc
gacgccgaaaccgcgcggcagaatgtcgaaagcgcgatcagccagaaactgttcgatagc
ctgggcaagacgctgaccacggttcccgaagggctcaacgtccacaagacgctgaagcgc
gtgatcgaagccaaagccgagatgttcaagaacggtgtgaacttcgactgggcgaccggc
gaagcgttggcgtttggctcgctgctgtcggaaggctatggcgttcgcctgtcgggccag
gactccggtcgcggcacgttcagccagcgtcacgccgtctggatcgatcaggacagcgag
aataaatatatcccgctctcgaccgtgccgcacggccgcttcgaagtgctggattcgccg
ctttccgaatatggcgtgctaggctttgaatatggctttgcgctggccgatcccaagagt
ctcgtgctctgggaagctcagttcggcgatttcgccaacggtgcgcagatcgtgttcgat
cagtatatcgcttcgtcggaaaccaagtggctgcgttccaatggtctcgtttgcctgttg
ccgcatggctatgaagggcagggtccggaacatagctcggcgcgtctggaacgcttcctg
cagctttgcgccgagggaaatatccaggtcgcgaacatcacgacccctgcgaactatttc
catgtcctgcgtcgtcagatgctgcggcctttccgcaagccgttgatcatcatggcgccc
aagtcgctgctgcgtcacaagctggcggtgagcaaggccgaggacttcctgggcgagacg
cacttcaagcggatcctgtcggaccctaacggggcggctgatgcggatacccgccgcctg
gtgctctgctcggggaaggtcttctatgacctgctcgaagcgcgcgacgcggccggtgac
acggatgttcagattgttcgtatcgaacaaatctatccgttcgccaccgaagcgctggcc
acgcgcatcaaacgcatgaccagcctggaagatgtggtttggtgccaggaagagccgcgc
aacaatggcgcctggttcttcgtggaaccctatgtcgaggaagcgttggcgcaggctggc
aaggcgccgatgcgcgcgcgctatgcgggccgcaaggctgccgcttcgcccgccacgggc
ctcgccaagcgccatgtcgccgagcagggcgccctcgtcgccgatgcgctgggccacagc
gttcgtgaagaaatccgccgccagaagaaaggctga
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