Sphingobium sp. EP60837: EP837_02183
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Entry
EP837_02183 CDS
T04432
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb00470
D-Amino acid metabolism
sphb00550
Peptidoglycan biosynthesis
sphb01100
Metabolic pathways
sphb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EP837_02183
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EP837_02183
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
EP837_02183
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphb01011
]
EP837_02183
Enzymes [BR:
sphb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
EP837_02183
Peptidoglycan biosynthesis and degradation proteins [BR:
sphb01011
]
Precursor biosynthesis
Amino acid ligase
EP837_02183
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATPgrasp_ST
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ANI78587
UniProt:
A0A173KXM9
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All DBs
Position
1:2237062..2238021
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AA seq
319 aa
AA seq
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MTRGPWHVAVLMGGWSAERPVSLSSGEGVAKALESRGHKVTRIDMDRNVAARLADADADV
VFNALHGVPGEDGTVQGMMDLMGLTYTHSGLATSVIAIDKQLTKQALVPHGIPMPGGHVV
TSASLFEADPLPRPYVVKPVNEGSSVGVAIITPDGNYGSPIGRDVEGPWQHFEELLAEPY
IRGRELTTAVLGDEALLVTELRPKSGFYDFDAKYTDGMTEHVCPAEIPNEISEACKALAL
RAHQLLGCKGASRSDFRWDDTQGVQGLYLLEVNTQPGMTPLSLVPEQAAKLGIDYAELVE
RIVEDALRQVPGAKGADNG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtggcccctggcatgttgctgtcctgatgggcggctggtccgccgagcggcct
gtttccttgtcgagcggcgagggggtcgcaaaagcgctggaatcgcgtgggcacaaggtc
acgcggatcgacatggaccgtaacgtcgccgcccgccttgccgacgctgatgctgacgtt
gtgttcaatgccttgcacggcgttcccggcgaggatggcacggtgcaggggatgatggac
ctgatgggcctcacctacactcattcgggcttggcgacatcggtcatcgctattgataag
caactgacgaagcaggcgctggtgcctcatggtatccccatgccgggcggccatgtcgta
accagcgccagcctgttcgaagctgatcccctgccgcgcccctatgtggtgaagccggtc
aacgaaggcagctccgtcggcgttgccatcataacgccggacggcaattacggctcaccg
atcggtcgcgatgtcgaaggtccatggcagcatttcgaggaactgctcgccgagccctat
attcgcggacgcgaactcaccaccgccgtactcggtgatgaagcgctgctagtgacggaa
ctgcggcccaagagcggcttctatgatttcgacgccaaatataccgacggcatgaccgaa
catgtatgcccggcggaaatccccaacgagatcagcgaggcgtgcaaggcgctcgccctg
cgcgcgcaccaactgcttggctgcaagggggcatcgcgctccgacttccgctgggatgac
acccaaggagtccaagggctttatctgcttgaggtgaatactcagccgggcatgacgccc
ttaagtctggtgcctgagcaggcggcgaaactgggcattgactatgccgaactggtcgag
cgtattgtcgaagacgcgctgaggcaggtgccgggcgcaaagggggcagacaatgggtga
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