Sphingomonas psychrotolerans: CVN68_13060
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Entry
CVN68_13060 CDS
T05307
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphc
Sphingomonas psychrotolerans
Pathway
sphc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVN68_13060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphc03400
]
CVN68_13060
Enzymes [BR:
sphc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CVN68_13060
DNA repair and recombination proteins [BR:
sphc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CVN68_13060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ATY32790
UniProt:
A0A2K8MFX6
LinkDB
All DBs
Position
2906591..2907973
Genome browser
AA seq
460 aa
AA seq
DB search
MRVVHLADEDDFEGWRDSARALAQGRVPPSEIVWQVGNAATDLFGDEAVLVPAAPTAFRV
PRTFLDLAQTVVLHSDPQRFALLYTLLAGLIATPRRIDDAADPLVQRLEEMAKAVRRDVH
KMRAFLRFREVHDDQGERYVAWFEPEHHIVRANARFFVDRFANMRWSILTPARALHWDGE
TLAEGPGATKADAPGDDPVEDVWKTYYASIFNPARLKTGMMLKEMPRKYWKNMPETALVK
ELVATARQRETGMVAKARSAIGGNIAAAWQKLREEAAGCTRCHLYKHATQTVFGEGPVDA
RMMFVGEQPGDQEDIAGRPFVGPAGQIFDRAIGAAGIDRAGVYVTNAVKHFKFEPRGKRR
IHAKPDAGEISACRWWYEQERLLVKPEMTVALGATAARQMLGKVVTISGTRGKAIELTEG
GLGWVTIHPSFLLRMPDKSRAEEEFAAFVEDLKGAAKALG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcgtacatttggcggacgaagatgatttcgaaggctggcgtgattcggcgcgg
gcgctcgcccaggggcgggtgccgccgtccgaaatcgtctggcaggtcggcaatgccgcc
accgatctgttcggcgacgaagccgtgctcgtccccgccgctcccaccgcctttcgcgtc
ccgcgcacattcctcgatctcgcccagaccgttgtgctgcattcggatccgcagcgcttc
gccttgctctacaccttgctcgccgggctgattgccacgccgcgccggatcgacgacgcg
gccgatccactggtccagcggctcgaggaaatggccaaggcggtacgccgcgacgtgcac
aagatgcgcgccttcctgcgcttccgcgaggttcacgacgatcaaggcgagcgctacgtc
gcgtggttcgagcccgagcatcatatcgtccgcgccaatgcccgattcttcgtcgatcgc
ttcgccaatatgcgctggtcgatcctgactcccgcgcgcgcgctccactgggacggtgag
acgctcgccgaagggccgggcgccaccaaagccgatgccccgggcgacgacccggtcgag
gatgtctggaagacctattacgcgtcgatcttcaatcccgcgcgattgaaaacgggcatg
atgctcaaggagatgccgcgcaaatattggaaaaacatgcccgagaccgcgttggtcaag
gaactggtcgcgacggcgcgccagcgggagacaggcatggtggcaaaggcacggtcggcg
atcggcggcaatatcgcggcggcatggcaaaagctgcgcgaagaggcggcaggctgcacc
cgctgccacctctacaagcatgcgacccagaccgtgttcggcgaaggtccggtcgacgcg
cggatgatgttcgtcggcgagcagccgggcgatcaggaggatattgccgggcggccgttc
gtcgggccggcggggcagatattcgaccgggcgatcggtgcggcggggatcgaccgcgct
ggcgtctacgtcaccaatgccgtcaagcacttcaagttcgagccacgcggcaaacggcgc
attcacgccaaacccgatgcgggcgagatcagcgcgtgccgctggtggtacgaacaggag
cggctgctggtgaaacccgagatgaccgtggcgctcggcgcgaccgcggcgcggcagatg
ctgggcaaggtcgtgacgatcagcggcacgcgcgggaaggcgatcgaactgaccgagggc
ggacttggctgggtgacgatccacccgagcttcctgctgcgcatgcccgacaagagccgc
gccgaggaagaattcgcggcgttcgtcgaggatctgaagggcgcggcgaaggcgctgggc
tag
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integrated database retrieval system
