Rhizorhabdus wittichii DC-6: HY78_00575
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Entry
HY78_00575 CDS
T05200
Name
(GenBank) DDE transposase
Organism
sphd
Rhizorhabdus wittichii DC-6
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_IS1595
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
ARR57001
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Position
107160..108182
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AA seq
340 aa
AA seq
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MDVLDRDKLPFPKSLPEFQRLFPDDGACASWLEKARWPDGFACPRCGVVGDPFRFTTRPV
ILMCRSCRRQTGLMVGTAMERSHIPLSVWFWAAYLVASQTTGISAVQLQRQLGLTRYETA
FGLLHKLRAAMVRPDQDRIGGQSGQHVEVDETWIGGRTRGEGRGTHHKTLVVAAVEVRHR
EPGTGQDRRRNGRYAGRVRLAIGADRSAGALGGFVQSAVEPGTLVITDDWSGYSGLQGGG
YDHHAIAQCGDPEVSEEFLPIVHLVFSNLKAWLNGIHHGVSTKHLQAYLNEFTFRFNRRF
YPFNAFRSLLGIASDIEAPTFAELYSGQWTHHTISSGCMP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtggacgttcttgaccgcgacaagctgccgttcccgaaatccctccccgagttccagcgg
cttttcccggatgatggcgcttgcgcgtcctggcttgaaaaagctcgctggcctgatgga
tttgcgtgcccacgctgtggcgtcgtcggcgatccgtttcgtttcaccactcggcctgtc
atcctgatgtgccgctcgtgtcgccgtcagaccggcctgatggtcggcacggccatggaa
cgaagccacatcccgctcagcgtgtggttctgggccgcttacctggttgcgagtcagacg
accggcatatctgccgtccagttgcagcgccagcttggcctgacccggtacgagacggcc
tttggcctgctccataaactgcgcgccgcgatggtgcgccccgatcaggatcggatcggc
gggcagagcggtcagcatgtcgaggtcgatgagacctggatcggcgggcgaacgcgcggc
gaaggccggggaacccaccacaaaacgctggtggtcgccgccgtcgaagttcgtcaccgg
gagcctggcactggccaggaccgccgccggaacggacgctatgccggaagggttcgattg
gccatcggtgcagaccgcagtgccggtgcccttggtggctttgtacagagcgcggtcgag
ccgggaacgctggtcatcaccgatgattggagcggctatagcgggttgcagggcggcggt
tacgaccatcacgccatcgcccagtgtggcgacccggaggtgtccgaagagttcctgccc
atcgtccatctggtgttctcaaacctcaaagcgtggctcaacggcatccaccacggcgtc
agcaccaagcatctgcaagcctacctcaacgagttcactttccgcttcaatcgccgcttc
tacccgttcaacgccttccgatccctcctcgggatcgccagtgatatcgaggcgccgacc
tttgccgaactctactcaggccaatggacccaccataccatatctagtgggtgtatgcct
taa
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