Rhizorhabdus wittichii DC-6: HY78_04330
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Entry
HY78_04330 CDS
T05200
Name
(GenBank) ATP-dependent DNA ligase
Organism
sphd
Rhizorhabdus wittichii DC-6
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
ARR52727
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Position
complement(898774..900372)
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AA seq
532 aa
AA seq
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MHAFSQLLDGLVYTRSRNAKLALIADYLRRAPDPDRGWALAALTGDLDLPAVKASAIQAI
VAERVDPLLFLMSRDYVGDLAETVALIWPKRIDQPAEIDDGSLGLAAVVDRLMRLGRAEA
PAALGEMLDHLDASGRFALLKLATGGLRVGISARLAKTGFAQAFGLDVDAVEEVWHALRP
PYAELFAWGLGGERPDPRGTPFFRPFMLAHPLEAETLDLADYAAEWKWDGIRVQIVGTGQ
AVRLYSRAGDDITATFPDIAAAADGIDAVLDGEMLVRGEAQGAAEHGGSAASFNALQQRL
GRKNVSSRMLADYPAFVRLYDLLIDGGDDLRALPWEARRARLEAFAARLDPTRFDLSAVI
AARDFDELAETRAGARDAAIEGVMLKRRDSPYVAGRRTGLWYKWKRDPLTVDCVMMYAQR
GHGKRSSFYSDYTFGCWSEEGELLPVAKAYSGFTDEELKWLDGFVRNHTVNRFGPVREVE
KTLVVELAFDSVHDSRRHKSGVAMRFPRIARIRRDKPPGEADTIETLRKLMV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccttctcccagctcctcgacggcctcgtctacacccgctcgcgcaatgcgaag
ctggcgctgatcgccgattatctgcgcagggcgcccgatcccgaccggggctgggcgctg
gcggcgctgaccggcgatctcgacctgccggcggtcaaggcctcggcgatccaggcgatc
gtcgccgaacgggtcgatccgctgctgttcctgatgagccgcgactatgtcggggacctc
gccgagacggtcgcgctgatctggcccaagcggatcgaccagcccgccgagatcgacgac
ggctcgctcggcctcgcggcggtggtcgatcggctgatgcggctcggccgggccgaggcg
ccggccgcgctgggcgagatgctcgaccatctcgacgcgagcggccgcttcgccctgctc
aagctcgcgaccgggggcttgcgggtcggcatctcggcgcggctcgccaagaccggcttc
gcccaggccttcggcctcgacgtcgacgcggtcgaggaggtgtggcacgcgctgcggccc
ccctatgccgagctgtttgcctgggggctgggcggcgaacggcccgatccgcgcggcacg
cccttcttccggccgttcatgctcgctcatccgctggaggcggagacgctcgacctcgcc
gactatgccgccgaatggaaatgggacggcatccgcgtccagatcgtcggcaccggccag
gcggtgcggctgtacagccgcgcgggcgacgacatcaccgcgacctttcccgacatcgcc
gcggccgcggacgggatcgacgcggtgctcgacggcgagatgctggtgcggggcgaagcg
cagggcgcggccgagcatggcgggtcggccgcctcgttcaacgccctgcagcagcggctc
gggcgcaagaacgtctcttcgaggatgctcgccgactatcccgccttcgtccgcctctac
gatctgctgatcgacggcggcgacgatctgcgcgcgctgccgtgggaggcgcggcgcgcg
cggctcgaagcctttgccgcgcggctcgatccgacgcgcttcgacctgtcggcggtgatc
gcggcgcgcgacttcgacgagctcgccgagacccgcgccggcgcccgcgacgcggcgatc
gagggggtgatgctcaagcgccgcgacagcccctatgtcgccggccgccgtaccggcctc
tggtacaagtggaagcgcgacccgctgaccgtcgactgcgtgatgatgtacgcccagcgc
ggccatgggaagcggtcgagcttctattcggactataccttcggctgctggtcggaggag
ggcgagctgctgcccgtcgccaaggcctattcgggcttcaccgacgaggagctgaaatgg
ctcgacggcttcgtccgcaaccacacggtcaaccgcttcggcccggtgcgcgaggtggag
aagaccttggtcgtcgaactggccttcgacagcgtccacgacagccggcgccacaagtcg
ggcgtggcgatgcgcttcccgaggatcgcccgcatccgccgcgacaagccccccggggag
gccgacacgatcgagacgctgaggaagctgatggtgtga
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