Rhizorhabdus wittichii DC-6: HY78_04965
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Entry
HY78_04965 CDS
T05200
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HY78_04965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_04965
Transporters [BR:
sphd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HY78_04965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
GHMP_kinases_C
Motif
Other DBs
NCBI-ProteinID:
ARR52842
LinkDB
All DBs
Position
1031769..1033256
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AA seq
495 aa
AA seq
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MTRPLLIALSTALLLAGCGGSDRGGQVSVSVIGRETRLRDPASGLPRQADAALLGAVAQG
LVRLDATAQVEPGLAIRWAISDDGLYYTFRLDHELADADRVAVQLRRLIRRYRDAGPGVR
IDAVREIVAVTPEVIEIRLSAPRPELLALLARPAYALPAGGGTGPLLVDGSVGRHTILRP
KPVADAIDDDRLKAFAKRRIHLRGERAALAVARFARGDIQLVTGGGYNDFIYTRLAGIPP
RNVQVDPANGLFGFRVARASSAAMAPEIRQALSMALDRDALGAALGATGWRPAQAILPPG
LTDLAEPSRPFWVQAFANVRGSDRQAFDSRVQTARRIVGIWRAQHGGDEPVRIAVAMPEG
PGSAILFAAIRRQWRAIDVDATRVGPRDAADLRLIDEVAPADQADWYLAHFLCAEGRPCS
EEADKAFDLARAATDPARRAHLIAEVEQRLAAIAPFIPIAQPLRWSLAAPDLTGFQLNAR
AVHPLAPLLGNQNGR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacccggcccctcctgatcgcgctttcgaccgcgctgctgctcgccggctgcggcggc
agcgaccgtggcggacaggtctcggtcagcgtgatcgggcgcgagacgcggctgcgcgat
ccggcgtcggggctgccgcgccaggccgacgccgcgctgctcggcgcggtggcgcaaggg
ctggtgcggctcgatgcgacggcccaggtcgaaccggggctggcgatccgctgggcgatc
tccgacgacgggctctactacaccttccggctcgaccatgagctggccgatgccgaccgc
gtcgccgtccagctccgccgcctgatccgccgctatcgcgacgccgggcccggcgtccgc
atcgacgccgtgcgcgagatcgtggcggtgacgcccgaggtcatcgagatccgcctgtcg
gcgccccgccccgagctgctggcgctgctggcacggcccgcttatgcgctgccggccggc
ggcggcaccggcccgctgctggtcgacgggtccgtcggtcgccacacgatcctgcgcccc
aagccggtcgccgacgcgatcgacgacgaccggttgaaggccttcgccaagcggcgcatc
cacctgcgcggcgagcgggccgcgctggcggtcgcgcgcttcgctcggggcgatatccag
ctcgtcaccggcggcggctataacgacttcatctacacccggctcgcgggcatcccgccg
cgcaacgtgcaggtcgatcccgccaacggcctgttcggcttccgggtcgcgcgcgcctcc
tccgcggcgatggcgcccgagatccgccaggcgctgtcgatggcgctcgaccgcgacgcg
ctcggcgccgcgctgggggcgacggggtggcggccggcccaggcgatcctgccgcccggc
ctgaccgacctcgccgaaccgagccggcccttctgggtgcaggccttcgccaatgtccgc
gggtcggaccggcaggcgttcgacagccgggtccagaccgcgcggcggatcgtcggcatc
tggcgcgcccagcatggcggcgacgagccggtgcggatcgccgtggcgatgcccgaaggc
ccgggatcggcgatcctgttcgcggcgatccgccggcaatggcgggcgatcgacgtcgac
gccacccgggtcggcccgcgcgacgccgccgacctgcggctgatcgacgaggtcgccccc
gccgaccaggccgactggtatctcgcccatttcctctgtgccgagggccggccgtgcagc
gaggaggccgacaaggcgttcgacctcgcgcgcgcggcgaccgatccggcgcgccgggcg
cacctgatcgccgaggtcgagcagcggctcgccgcgatcgccccgttcattccgatcgcg
cagccgttgcgctggtcgctggccgcgcccgacctgaccggcttccagctcaacgcccgc
gcggtccacccgctggcgccgctgctggggaaccaaaatggccgctga
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