Sphingomonas sp. FARSPH: DM480_06195
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Entry
DM480_06195 CDS
T05685
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf00020
Citrate cycle (TCA cycle)
sphf00640
Propanoate metabolism
sphf00660
C5-Branched dibasic acid metabolism
sphf01100
Metabolic pathways
sphf01110
Biosynthesis of secondary metabolites
sphf01120
Microbial metabolism in diverse environments
sphf01200
Carbon metabolism
Module
sphf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DM480_06195
00640 Propanoate metabolism
DM480_06195
00660 C5-Branched dibasic acid metabolism
DM480_06195
Enzymes [BR:
sphf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
DM480_06195
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AXJ95160
UniProt:
A0A345WNA8
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Position
complement(1282097..1283296)
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AA seq
399 aa
AA seq
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MNIHEYQAKELLAKFGVPVPAGFAAMSVEEAVEASKKLPGPLYVVKAQIHAGGRGKGKFK
ELPAEAKGGVRLAKTEDEVRHAATEMLGNTLVTIQTGEAGKQVNRLYVTDGVDIAKEFYL
ALLVDRATGRVAFVVSTEGGMDIEEVAHSTPEKIHTFAVDPATGFQPHHGRAVAKALGLT
GDLAKQAQSLASKVYAAFLGTDAAQIEINPLAVTDDNKLMVLDAKVGFDSNAMFRHKDLA
ELRDETEEDPAEIEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVG
GGANKEKVTAAFKIILKDPNVKGILVNIFGGIMRCDIIADGIVAAAKEVNLQVPLVVRLE
GTNVEKGKEILANSGLAIVPANDLGDAAKKIVAEVQKAA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcacgaatatcaagccaaggaactgctggcgaagttcggcgtgcccgttccg
gccggcttcgccgcgatgagcgtcgaggaggcggtcgaggcgtccaagaagctgcccgga
ccgctctacgtcgtgaaggcgcagatccacgccggcggccgcggcaagggcaagttcaag
gaactgcccgccgaggcgaagggcggcgtccgcctcgccaagaccgaggacgaggtccgc
cacgccgcgaccgagatgctcggcaacacgctggtgacgatccagacgggcgaggccggc
aagcaggtcaatcgcctgtacgtcaccgacggcgtggacatcgccaaggaattctacctc
gcgctcctcgtcgaccgcgccaccggccgcgtcgccttcgtcgtctcgaccgagggcggc
atggacatcgaagaggtcgcgcattcgacgccggagaagatccacaccttcgcggtcgat
ccggcgacgggtttccagccgcaccacggccgcgccgtcgccaaggcgctcggcctgacc
ggcgatctggccaagcaggcgcagagcctcgcgtcgaaagtctatgccgcgttcctcggc
accgacgcagcgcagatcgagatcaacccgctcgccgtcacggacgacaacaagctgatg
gtgctcgacgccaaggtcggtttcgattcgaacgcgatgttccgtcacaaggacctcgcc
gaactgcgcgacgagaccgaggaagacccggccgagatcgaggcgtcgaagtacgacctc
gcctacatcaagctcgacggcgacatcggctgcatggtcaacggcgccggcctcgccatg
gcgacgatggacatcatcaagctcaacggcatgttcccggccaacttcctcgacgtcggt
ggcggcgccaacaaggaaaaggtgacggccgcgttcaagatcatcctcaaggatcccaac
gtgaagggcatcctggtcaacatcttcggcggcatcatgcgctgcgacatcatcgccgac
ggcatcgtcgcggcggcgaaggaggtgaacctgcaggtcccgctcgtcgtccggctcgag
ggcacgaacgtcgagaagggcaaggagatcctcgccaattccggcctcgccatcgtgccg
gccaatgacctgggcgatgcggcgaagaagatcgtcgcggaggtccagaaggcggcgtga
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