Sphingopyxis fribergensis: SKP52_06010
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Entry
SKP52_06010 CDS
T03542
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphk03021
]
SKP52_06010
Transcription machinery [BR:
sphk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SKP52_06010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_16
Xre-like-HTH
HTH_23
HTH_37
GerE
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AJA08127
UniProt:
A0A0A7PJL7
LinkDB
All DBs
Position
complement(1264919..1265455)
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AA seq
178 aa
AA seq
DB search
MAEAEDADILAAAIAGDRDAFEALLRRHYDRIHGLAWQLTGSRADADDIAQDVCCILAEK
LPAFRGDAKFTTWLCSIVYNACRDFHRRRSALTRFTGRLSIMVGLTRGPDGRDLYDALWI
ESAIAQLKPDLRDTAVLIARQQLTHAEAAQILGVAEATVSWRMHEIRRQLAANSGADD
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccgaagacgcggatattctcgctgcggccatcgccggggaccgcgacgct
ttcgaagccctgctgcggcgccactatgatcgcatccatggcctcgcgtggcagctcacc
ggatcgcgcgccgacgccgacgatatcgcgcaggacgtatgctgcattctcgcggaaaag
ctccccgcctttcgcggcgacgccaaattcacgacttggctgtgcagcatcgtctataat
gcctgccgcgattttcaccggcggcggtcggcgctgacccgcttcaccgggcggctcagt
atcatggtcgggctgacgcgagggcccgatggacgcgacctttacgacgcgctgtggatc
gaaagcgcgatcgcccagctgaaacccgaccttcgcgataccgcagtgctgattgcccga
cagcagctgacccacgccgaagccgcgcaaatcctcggggtcgctgaagccacggtgtca
tggcggatgcacgagattcggcgccagctcgcggcaaattcgggagccgacgattga
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