Sphingopyxis fribergensis: SKP52_08675
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Entry
SKP52_08675 CDS
T03542
Symbol
ispDF
Name
(GenBank) Bifunctional enzyme IspD/IspF
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00900
Terpenoid backbone biosynthesis
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SKP52_08675 (ispDF)
Enzymes [BR:
sphk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SKP52_08675 (ispDF)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
SKP52_08675 (ispDF)
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Motif
Pfam:
YgbB
IspD
NTP_transf_3
ARL17
UDPGP
Motif
Other DBs
NCBI-ProteinID:
AJA08648
UniProt:
A0A0A7PHH0
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Position
complement(1825972..1827147)
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AA seq
391 aa
AA seq
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MSDSAPSPSPRLAVVLLAGGQGTRAGLGLPKQLAVLGGKPVLRWSLDAFAAHPAVNGGVL
VANGDVATAVNPLPAGWISVDPGTERQQSVGNALAALADWDDQALVLVHDAARPGVTNEV
IDRLLGALRTAEAAIPTLPVPDTLVEQAHDEAGDVVDRRVLARVQTPQAFRLDVLRRAHA
EAVEAAATDDAQLVRRLGIVVTAVPGDARLHKLTYAEDIAILGGLLGIGTMRTAVGMGYD
VHRLVIDKPLWIGGIEIAYSHGLEGHSDADVALHALTDAILGALGDGDIGDHFPPSDPQW
RGAASHRFLSFAADRVAARGGQIDHVDLTIIAEAPKIGPHRAAIRARIAEILAIPLERVS
VKATTTERLGFTGRREGISAQAVATLQLPEN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattccgccccctccccgtcgccgcgtcttgcggtcgtgctgctcgccggcggc
caaggaacgcgcgcgggtcttggtttgccgaagcaactcgcagtgctgggcggcaagccc
gtgctcaggtggagccttgatgcgtttgcggcgcatcctgcggttaacggcggcgtgctg
gtggcgaatggtgatgtcgcaacggcggtcaatccactgccagcaggctggatttccgtc
gatcccggcaccgaacgccagcaatcggtcggcaatgcactcgcagccctggccgattgg
gatgaccaggcgctagtgcttgttcacgacgccgcacggccgggcgtgaccaacgaagtc
atcgaccgcttgctcggcgcgctgagaaccgccgaagcggcgatcccgaccttgccggtt
cccgatacgctcgtcgaacaggcgcacgacgaggccggcgacgtggtcgaccggcgtgtg
ttggcgcgcgtccagacgccgcaagcctttcgcctggacgttttgcgccgcgcgcatgcc
gaagctgtcgaggccgcggcgacggatgacgcgcaactcgttcgccgccttggcatcgtc
gtcaccgcggtccccggcgacgcgcggctccataaactgacatatgccgaggatatagcg
atcctcgggggcctcttggggattggcacgatgcgaaccgctgtcggcatgggatatgac
gttcaccgcctagtcatcgacaagccgctgtggatcggcgggatagaaatcgcgtatagt
catggacttgaagggcatagcgatgccgacgtcgcgcttcatgccctgaccgacgcgatc
ctaggcgcgctcggcgatggcgatatcggcgaccattttccgccgagcgatccgcaatgg
cgtggcgcggcgtcgcaccgcttcttgtcctttgcagcggatcgcgtcgcggcgcgcggc
gggcagatcgaccatgttgacctgacgatcattgccgaggcgccgaagatcggcccgcac
cgtgccgcgatacgggcacgcattgccgaaatccttgcgattccacttgaacgggttagt
gtgaaggcaacaacgacagagcggctgggcttcaccggtcgccgcgaggggatctctgcg
caggccgtcgcgaccttacaacttccggagaattga
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