Sphingopyxis fribergensis: SKP52_09630
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Entry
SKP52_09630 CDS
T03542
Name
(GenBank) hypothetical protein
KO
K03556
LuxR family transcriptional regulator, maltose regulon positive regulatory protein
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphk03000
]
SKP52_09630
Transcription factors [BR:
sphk03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
SKP52_09630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
AAA_16
AAA_22
HTH_38
HTH_24
Sigma70_r4
nSTAND3
Sigma70_r4_2
HTH_20
PhoH
TnsD
Motif
Other DBs
NCBI-ProteinID:
AJA08835
UniProt:
A0A0A7PFQ3
LinkDB
All DBs
Position
2030456..2033152
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AA seq
898 aa
AA seq
DB search
MTIQPGSRTDTKAPHRAATPRPVTHGKFAPPRFPNDLVGIERWQSWLDTIAQHEICFVRA
PAGYGKTAFAATLFAQARSIGWYAGWVSFDPEDNDSAAVGHLFEAVRLARGAPAEDSVSA
LCAAPASAAILASALAERIEACDQPVLLVLDNIDRIAEPRLVDVLDRLLRHPPRQLRLVL
VGRDTAAIRADETEGRGMLLRLGRTEIGLTNDDICVFLRAAGSGLDARSCAKLNGLLLGW
PTGLRMAVQKLDRLKKGDWSALTAQIDAYLLPLWDEQDDGIWQFLGRASVAPQLNDELVR
LLGEGDRGISILEDLHAQGMFVERSDEGNGCYYIHPAVRPVFRQFLDQHEPKRAIELHRA
AGRYYETLGLSAHAIDQFLSAGADADAARLVGDTALSALARGGVEQLAAWLDALPCELIS
KSVALIRARAWAAVLAAEPDAEAAIAALRAAGDIAEAQVIGVLHAGLVRDVPESVVEEGD
PFLAAPEQLSGFAVDMIRAFLAYGAQSRGLFGLVHDVVRPLRLCAAATAMDLPNAIATRA
RAAAARAQGQLAEAERVLRDGRRIPGQLGLAGALIDAALARSCYERDDLPEAANLAADAL
AWLEPSCFEDALIEAFQICIRVAAATAKVDEAATLIDRAELIAFARNWVPLKAMCVVERA
RLRLPPTIDVEAVLAVADEDAAVLDPLSAQGRAFALLCEMRAYEAIAHGDRPRLTTVAER
LLRLASNADDAELRATATLLNILPQLSGRCDKMVELETVRFLNHAAGAGFHRTIVDILDV
TGVRAVQNFCSEAYSSGSFLALLKLAEPSRRNPALEGSTSAAPGEAFSFLTEREIEILSA
LNAGESNKEIARTLQLAPETVKWHLKNVMRKLRANSREEAVQNASTLGLTLIEPAVRD
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccagccgggatcgaggaccgacacaaaagcaccgcatcgcgcggctacaccg
cggccggtcacgcacggcaagttcgccccgccccgcttccccaacgatctcgttggcatc
gaacgttggcaatcctggctcgatacgattgcgcagcatgaaatctgcttcgttcgggcg
cctgccggctatggcaagacggcctttgccgcgacgctctttgcacaggcccgttcgatc
ggctggtacgccggctgggtatccttcgatcccgaagacaatgactccgcagcagtcggg
cacttgttcgaagcggtgcgcctcgcccgcggcgcccccgccgaagatagcgtcagcgcg
ctgtgcgccgccccggcctccgcggccatcctcgccagtgcgttggccgaacggatcgag
gcctgcgaccagccggtacttcttgtgctcgacaatatcgaccgcattgccgaaccgcgc
ctggtcgacgttctcgaccgtctgttacgccatccgccccggcaactacgccttgtcctc
gtggggcgggataccgcggcgatcagggcagacgagactgaaggccgcggcatgctgttg
cggctcggccggaccgagatcgggctgaccaacgatgacatatgtgtctttttacgcgct
gcgggttctggactcgatgcccgcagctgcgcaaagctcaacgggttgctgctgggctgg
cccaccggcctccgaatggccgtacaaaaactggatcggctcaaaaagggcgactggagc
gcgctcacggcgcaaatcgatgcctatctgctgccgctatgggatgaacaggacgacgga
atatggcagtttctcgggcgcgctagtgtcgctccacaattgaacgacgagctggttcgt
ttgctgggcgagggagaccggggcatatcgatcctcgaagatcttcacgcgcaagggatg
tttgtcgagcgatccgacgagggcaatggatgctactatattcaccctgccgttcggccg
gtatttcggcaatttctcgaccagcacgagcccaagcgcgcaatcgagcttcatcgcgcc
gcgggccgctactatgaaacgctaggactgagcgcacatgcgatcgaccagttcttgtct
gctggcgccgatgccgatgcagcacgactggttggcgacacggcgctgtcggccctcgct
cgcggcggcgtcgagcagcttgccgcttggctcgatgcacttccttgcgagctgatttcg
aaaagcgtcgccctcatccgcgcgcgcgcctgggcggcggttctggctgcggagcctgat
gccgaagcggccattgcggcactccgggcagcgggcgacatagccgaagcgcaagtgatt
ggcgtactgcacgccggacttgtccgcgacgtgcccgagagcgtggtcgaggagggagat
ccgttcctggcggcaccggaacaactgtcgggcttcgctgttgacatgatccgcgccttt
cttgcctatggagcgcaaagccgcggccttttcggtctggtgcacgatgtcgtcaggccg
ctccggctttgtgccgccgcgaccgcgatggatttgccaaacgcgatcgcgacccgcgct
agagcggccgccgcccgcgcacagggacagttggcggaggccgaacgggtgctgcgtgac
ggccgccggattcccgggcagcttgggttggcaggtgctttgatcgacgccgccctggcg
cgtagctgttacgagcgtgacgacctgcctgaagccgccaatcttgccgccgatgccctc
gcttggctggaaccaagctgttttgaggacgcgcttatcgaggcgtttcagatctgcatt
cgcgtcgcggcggcgacggccaaggtggatgaagcagcgaccttgatcgaccgcgccgaa
ctgatcgcctttgcacgcaactgggtgccgttgaaggcgatgtgcgttgtcgaacgggcg
cggctccgattgccgccaacgatcgatgtcgaagccgtgttggcggtcgccgatgaggac
gccgccgtgcttgacccgctatcggcgcagggacgcgcatttgccctgctctgtgaaatg
cgtgcctatgaagcgatcgcccatggtgaccgtccacggcttacgaccgtggcggaacgg
cttctgcgccttgcttcaaacgccgatgatgccgagcttcgggcgaccgcgacgctgctc
aacatccttccgcagctcagcgggcgctgtgacaagatggtcgagctcgaaactgtacgt
tttctcaatcacgcagccggggccggcttccaccgcacgatcgtcgacatactcgacgtc
accggcgtgcgtgcggtccagaatttctgtagcgaggcctattcgtcgggctccttcctc
gcgctgctcaaactggccgaaccgtcgcggcgcaatcccgcgctcgaggggagcacctcc
gccgcaccgggcgaggcgttttccttcctgaccgaacgcgagatcgagatattgagcgcg
ctcaacgccggggaatcgaacaaggaaatcgcccgcacgctccaactcgcgcccgaaacg
gtcaaatggcatctcaaaaatgtcatgcgaaaactgcgcgcgaacagtcgggaagaggcg
gtgcaaaatgcttcgaccctcggcctgacattgatcgagcccgccgtccgcgattag
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