Sphingopyxis fribergensis: SKP52_14095
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Entry
SKP52_14095 CDS
T03542
Symbol
csd
Name
(GenBank) Putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00450
Selenocompound metabolism
sphk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SKP52_14095 (csd)
Enzymes [BR:
sphk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SKP52_14095 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SKP52_14095 (csd)
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Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AJA09704
UniProt:
A0A0A7PIC7
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All DBs
Position
3010367..3011608
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AA seq
413 aa
AA seq
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MLHPEPAQKAWNPDAIRSDFPLIAGLSGYGRITYLDNAASAQKPRSVMDSMTDGAFTRYA
NVHRGAHRLSGLATASYEGARARLQAFLNAPGAEQVIFTKSATEAINLVASAFAAIVAPG
DEIIVSSLDHHANLVPWHMLRERRGIVLRWVDPDAFGNLDPAAFADAITHRTRLVAVTHM
SNVFGVLTPLEAIVRLAHERGVPVLADGTQAVVHHAIDVSALDVDFYALTGHKLYGPTGI
GALYAKPGWLERMSPMLGGGEMVATVGRNHVEYAPAPHKFEAGTPPILEAIGLVAALDYI
ESVGRSSIAAHEAALGRHARARFAAIPGITVFGDTEKPGPILTFASASAHANDIAAILDG
KGICVRAGAHCTQPLHQMLGFSSTCRASFAMYSTLAEVDALADAVDEALTILK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaccccgagcccgcccaaaaggcctggaatcccgatgcgatcaggagtgacttc
ccattaatcgcgggtttgtcggggtatggaaggatcacatatctcgataatgcggcgtcg
gcacagaagccacgcagcgtgatggacagtatgaccgacggtgcattcacccgttatgcc
aatgtccatcgtggagcccaccggcttagcggcctcgcgacggcgagctacgaaggcgcg
cgcgcccggctgcaggcctttttgaacgctccgggtgcagagcaggtcatttttacgaaa
tcggcaaccgaggcgatcaatctcgtggcatcagcctttgccgcgatcgttgcaccgggg
gatgagattattgtctcctcactcgatcatcacgccaatctggtgccgtggcatatgctt
cgggaacggcgtggcatcgtcttgcgctgggtcgatcctgacgcattcggcaatctcgat
cccgccgctttcgctgacgccatcacgcatcgcacgcgccttgtggcggtcacgcacatg
tcgaatgttttcggggtattgacgccactcgaggcaattgttcggcttgcccatgaaagg
ggcgttcctgtgctcgcagatggaacccaagccgtagtacaccacgcaatcgacgtctcg
gctctcgacgtcgatttctatgctctcaccggccacaaactttatgggccgacgggcatt
ggggctctctatgccaagccaggctggctcgagcgcatgtcgccaatgctcggcggcggc
gagatggtcgcaacagtaggtcgcaatcacgtcgaatatgcgcccgcgccgcacaagttc
gaagccggaacgcccccaattctcgaagcgatcggacttgtcgctgcgctcgactatatc
gagagtgtgggacgttcgagtatcgcggcccacgaggccgcgcttggtcgccacgcgcgg
gcccgattcgcggctattccgggcatcaccgtctttggcgataccgaaaagcccggtccg
atcctgacgtttgcctctgccagcgcccatgccaacgatatagcggcaatcctggacggc
aagggcatctgcgtccgtgccggagcgcactgcactcaaccgcttcatcaaatgctgggc
ttcagttcgacatgccgcgcgtcgttcgccatgtacagtacgctggctgaagtcgacgct
ctggccgatgcggtcgacgaggcgttgacaattctaaagtga
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