Sphingopyxis fribergensis: SKP52_16435
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Entry
SKP52_16435 CDS
T03542
Name
(GenBank) ATP-dependent DNA ligase
Organism
sphk
Sphingopyxis fribergensis
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
AJA10161
UniProt:
A0A0A7PJ88
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Position
complement(3498076..3499644)
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AA seq
522 aa
AA seq
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MKRFAALIDRLIYTRSRNSKLALIVDYLRHTPDPDRGWAIAALTESLDFPAVKAGTVRTL
LATRVDEELFRLSRHFVGDTAETAALLWPDAPGAKADLSVSAAVDALAAASRSDAPAVVA
SLLDRLDADGRYALLKLALGGMRVGVSARLAKQAFAQTFDVPVDDVEELWHAIPPPYAPL
FAWGEGRAERPDLKDVAFFRPFMLAHPLGDGTVDLADYAAEWKWDGIRVQIVHGGGETRI
YSRGGEEISGAFPELVAAFDQEAVIDGELLVRGEVQGGEAASFNALQQRLGRKTVSKKML
ADYPAFVRVYDLLAVDGNDLRSLPWTERRRQLEAFVPRLADSHFDLSQVIDASDFDDLAE
RRAGARDAAIEGVMLKRRDAPYVAGRRAGLWYKWKRDPLTADCVMMYAQRGNGRRASFYS
DYTFGCWSDAGELLPVGKAYSGFTDEELKWLDKFVRDNTLNRFGPVREVEKSLVLEVAFD
SIHASKRHKSGLAMRFPRISRIRRDKPAEEADRIAALQAMVT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcttcgcggccctgatcgaccggctgatctacacgcgttcgcgcaacagtaag
ctggcgctgatcgtcgattatttgcggcatacgcccgatccagatcgcggctgggcgatt
gcggcgctgaccgagagcctcgatttcccggcggtgaaggcgggaacggtgcggacctta
cttgcgacacgggtcgatgaggaattgttccgtctatcgcggcatttcgtcggcgatacg
gcggagacggcggcgttgctgtggccggatgcgccgggggcgaaagccgacctcagcgta
tcggccgcggtcgatgcgctcgccgccgccagccgcagcgacgccccggcagtcgtcgct
tcactgctcgaccgcctcgatgccgacgggcgttatgcgctgctcaagctcgcgctcggc
gggatgcgcgtcggcgtgtcggcgcggcttgcgaaacaggcgttcgcgcagacgttcgac
gtgccggtcgacgatgtcgaggagctgtggcacgcgatcccgccgccctatgcgccgctc
tttgcgtggggcgagggcagggccgagaggcccgacctgaaagacgttgccttcttccgc
cccttcatgctcgcgcatccgctcggcgacggaacggtcgacctcgccgactatgccgcc
gagtggaaatgggacggcattcgcgtccagatcgtccatggcggcggcgagacgcggata
tatagccgcggcggcgaggagatcagcggcgcatttcccgaactggtcgcggcgttcgat
caggaagcggtgatcgacggcgaactgctcgtgcgcggtgaggtgcagggcggcgaggcg
gcgagcttcaacgcgttgcagcagcgacttgggcgcaagaccgtgtcgaagaagatgctc
gccgattatcccgcgttcgtacgcgtctacgacttgctcgcggtcgacggcaacgatttg
cgctcgctgccgtggaccgaacggcggcggcagcttgaagccttcgtcccgcgccttgcc
gacagccatttcgacttgtcgcaagtgatcgacgccagcgatttcgatgacctcgccgag
cgccgcgcgggtgcgcgcgatgcggcgatcgagggggtgatgctcaagcgccgcgatgcg
ccctatgtggcggggcggcgcgcggggctttggtataaatggaaacgcgacccgctcact
gccgattgcgtgatgatgtatgcgcagcgcggcaacggccgccgcgcgagtttctattcg
gactataccttcggctgctggtctgatgcgggtgaattgctacctgtgggcaaggcctat
tcgggcttcaccgacgaggaattaaagtggctcgacaaattcgtccgcgacaacacgctg
aaccgtttcggccccgtgcgcgaggtcgaaaagtcgctcgtgctcgaggtcgcgttcgat
tcgatccacgcgtccaagcgccacaagtcagggctcgcaatgcgcttcccgcgcatatcg
cgcatccgccgcgacaagcccgccgaggaagccgaccggatcgcggcgctgcaagcgatg
gtaacttaa
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