Sphingopyxis fribergensis: SKP52_18185
Help
Entry
SKP52_18185 CDS
T03542
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphk03000
]
SKP52_18185
Transcription factors [BR:
sphk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SKP52_18185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_24
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AJA10507
UniProt:
A0A0A7PRA0
LinkDB
All DBs
Position
complement(3854212..3855132)
Genome browser
AA seq
306 aa
AA seq
DB search
MSRLPPLAAIRTFEAAGRLQNFSRAAEELGLTQAAVSYQIRQLEDRLGRALFVREKGRVR
LSETGQRLLPAISNAFATMGDAFAALGSDEADVLTINAVTSFGGTWLSARIGSFQLLYPE
LAVRMSMSNHLIDFDASNVDVAIRMGKGRWPGLRSDFLMRQHVAPLASPAFIEANGINEP
ADLLRVQRLAPNDSWWAEWFAAAGVTTLPVPSRRGIELDSQLQEASAVQAGFGIAMMTPL
FWQTELASGRMVQPFDTLHVSGFGMWLVHRDNRVGVRKIERFREWLHAEIAKDRHLLPDA
LWEPLP
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcctgccgcctcttgccgccatacgcaccttcgaagccgccggtcgtttgcag
aatttctcgcgcgccgccgaggagctggggctgacgcaggccgcggtgagttatcaaatc
cgccaattggaggatcgcctcggccgcgcgctgttcgtgcgcgagaagggccgagtgcgc
ctgtccgaaaccgggcagaggctgctccccgcgatcagcaatgccttcgcgacgatgggc
gatgccttcgccgcattgggcagcgacgaggccgatgtgctgacgatcaacgcggtgacg
agtttcgggggcacctggctcagcgcgcgcatcggcagctttcagctcctctatcccgag
cttgcggtacgcatgtcgatgagtaaccatttgatcgatttcgatgcctcgaatgtcgac
gtcgcgatccgtatgggaaagggccgctggccggggctgcgcagcgatttcctgatgcgc
cagcatgtcgcgccgctcgcgtcgcccgccttcatcgaggcgaacggcatcaacgagccc
gccgacctgctgcgcgtccagcggctcgcgccgaacgatagctggtgggccgaatggttc
gccgccgccggggtgacgacgctgccggtgccctcgcgccgcggaatcgaactcgacagc
cagttgcaggaggcgagcgcggtgcaggcggggtttggcatcgcgatgatgacgccgctg
ttctggcagaccgaactcgcaagcggccgcatggtccagcccttcgacacgctccacgtc
tcgggcttcggcatgtggctcgtccaccgcgacaaccgtgtcggggtgcggaagatcgag
cgcttccgcgaatggctgcacgccgaaatcgcgaaggatcgccacctgctccccgacgcg
ctatgggagccgctgccatga
DBGET
integrated database retrieval system
