Sphingopyxis fribergensis: SKP52_21060
Help
Entry
SKP52_21060 CDS
T03542
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SKP52_21060 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphk03400
]
SKP52_21060 (mutS)
DNA repair and recombination proteins [BR:
sphk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SKP52_21060 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
AJA11076
UniProt:
A0A0A7PLV6
LinkDB
All DBs
Position
4428065..4430728
Genome browser
AA seq
887 aa
AA seq
DB search
MPVTARSAANTNSPAPAATPMMAQYWSLKDKAGDCLLFYRMGDFFELFFDDAKAAAATLD
IALTSRGEHDGQPVAMCGVPVHAAESYLARLIRAGHRVAIAEQIETPAEAKARGGSKALV
ARDIVRFVTAGTLTEESLLEGRSANRLAALAQIGSDGDVAIAAADISTGRFEVVAVRSEQ
VDAELARLAPSELLLSESAEELPISSARQIVRRPPADFSSTSAQKRLETFFGVQTLDGFG
QFGRGEIAAMGALVAYLDHVGTGGPTFLQPPLRHLASGRMAIDAATRESLELVRTMAGAR
DGSLLGTIDRTVTAAGARLLADDLASPLTDKDAILDRLDLVDGLARDSLWRGELRAALRA
LPDAGRALGRLVAGRGGPRDLAQLRDALGGARLLRERLARRPDLPPLLMRLLPGLDGHGT
LVDELSRALIETPPVDAAQGGYVAEGYDHALDALRETARDGRKAIAALEADYRDRTGIAS
LKIRHNGVLGYHVEVPAKHADALMAPESGFTHRQTLAGVVRFNSADLHEAASRVTQAGVH
AIAAEAAHLELLTDAAIARREAIAASCDVLARIDVAAALADHAMSHNWCRPDLADTPCLD
VTGGRHPVVEAALAKSGERFVPNDVSLSTSDRLWLVTGPNMGGKSTFLRQNALIVVLAQA
GGFVPAASAKLGLVDRLFSRVGASDNLARGRSTFMVEMVETAAILAQATPQSFVILDEVG
RGTSTYDGLALAWSVVEAVHEVNKCRCLFATHYHELTRLAETLGALSLHHVRAREWQGDL
VLLHELAEGPADRSYGLAVARLAGVPAGVVKRAEAVLAKLEAGREKTGGLAAGLDDLPLF
AATLAEAPAAAKDALREALAGIDPDALAPREALDTLYALKRLIADES
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcaccgcccgctccgctgccaatacgaatagtcccgcgcccgccgcaacgccg
atgatggcgcaatattggtcgctgaaggacaaggcaggcgattgcctgctcttctatcgc
atgggcgattttttcgagctgttcttcgacgatgcgaaggcggccgccgcgacgctcgac
atcgcgctgacctcgcgcggcgagcatgacgggcagccggtcgcgatgtgcggcgttccc
gtccacgccgcagaatcctatctcgcgcggttgatccgcgccgggcaccgcgtcgcgatc
gccgagcagatcgagaccccggccgaggcgaaggcgcgtggcggctcgaaggcgctggtc
gctcgcgacatcgtgcgcttcgtcaccgcgggcacgctcaccgaagaatctttgctcgaa
ggacggagcgcgaaccgcctcgccgcgctcgcgcagatcggcagcgacggcgacgtggcg
attgccgccgccgatatttcgaccgggcgtttcgaggtcgtcgcggtgcgcagcgagcag
gtcgatgccgaactcgcgcggctcgcgccctcggagcttctgctcagcgaaagcgccgag
gagctgccgatctcgtcggcgcggcagatcgtgcgccgcccgcccgcagacttttccagc
acgagcgcgcaaaaacgcctcgaaacttttttcggcgtccagacgctcgacggcttcggc
cagttcgggcgcggcgaaattgccgcgatgggtgcactcgtcgcctatctcgaccatgtc
ggcaccggcgggccgacctttctccagccgccgctgcgccacctcgcatcggggcggatg
gcgatcgatgccgcgacgcgcgagagcctcgaactcgtccgcacgatggcgggcgcgcgc
gacggcagcctgctcgggacgatcgaccgcaccgtcaccgcggcgggtgcgcgattgctc
gccgacgatctcgcgagcccgctcaccgacaaggatgcgatcctcgaccggctcgatctc
gtcgatggtcttgcgcgcgattccttgtggcgcggcgaactgcgtgctgcgctgcgcgct
ctccccgatgccgggcgtgcgctcggccgcctcgtcgcggggcgtggcggcccgcgcgac
ctcgcgcagctgcgcgatgcgctcggtggcgcaaggctgctgcgcgaacggctcgcgcgt
cggcccgacctgccgcctttgctcatgcggctgcttcccggactcgacggccacgggacg
ctcgtcgacgaactcagccgcgcgctgatcgaaaccccgccggtcgacgccgcgcagggc
ggttatgtcgccgaaggctacgatcatgcgctcgacgcgctccgcgaaaccgcgcgcgac
gggcgcaaggccatcgccgcgctcgaagccgactatcgcgaccgcaccggcatcgcttcg
ctcaagatccgccacaatggcgtgctcggctatcatgtcgaggtgccggcgaagcacgcc
gacgcgctgatggcgcccgaatcaggcttcacccatcgccagacgcttgcgggcgtcgtg
cgcttcaattccgcggacctccacgaagccgcgagccgggtgacgcaggcgggtgttcat
gcgatcgccgccgaggccgcgcatctcgaattgctgaccgatgccgcgatcgcgcggcgc
gaagcaatcgctgcttcctgcgatgtgcttgcgcgcatcgacgttgccgcggcgctcgcc
gaccatgcgatgagccacaattggtgccgtcccgacctcgccgacaccccgtgcctcgac
gtcacgggcgggcggcatccggtggtcgaagccgcgctcgcgaaatcgggcgaacgcttc
gtccccaacgatgtctcgctctcgacaagcgatcgcctgtggctcgtcaccggcccgaac
atgggcggtaaatcgaccttcctccgccagaatgcactgatcgtcgtgctcgcgcaggcg
ggcggctttgtcccggccgcgtcggcgaaactcgggctcgtcgaccggttgttcagccgt
gtcggcgcgagcgacaatctcgcgcgcgggcgctcgaccttcatggtcgagatggtcgag
accgcggcgatcctcgcgcaggcgaccccgcaaagcttcgtcatcctcgacgaggttggg
cgcggcacctcgacctacgacgggctcgcgctcgcctggtcggtggtcgaggcggtgcat
gaggtcaacaagtgccgctgcctcttcgcgacgcactatcacgaactgacgcgcctcgcc
gaaacgctgggcgcgctctcgctccaccacgtccgcgcgcgcgaatggcagggcgatctg
gtgctgctccacgaactggccgaggggcccgccgaccgcagctacggccttgcggtcgca
cgcctcgcgggggttcccgcgggtgtcgtcaagcgcgccgaggcggtgctcgccaagctc
gaggcagggcgcgagaaaaccggcgggctcgccgcaggcctcgatgacctgccgctgttc
gccgcgacgcttgccgaagcgcccgccgcagcgaaggacgcgctgcgcgaggcgctcgcg
ggcatcgatcccgacgcgcttgcgccgcgcgaggcgctcgacacgctgtacgcgctcaag
cggttgatcgccgacgaatcatga
DBGET
integrated database retrieval system
