Sphingomonas sp. MM-1: G432_10535
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Entry
G432_10535 CDS
T02498
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sphm
Sphingomonas sp. MM-1
Pathway
sphm00300
Lysine biosynthesis
sphm00470
D-Amino acid metabolism
sphm01100
Metabolic pathways
sphm01110
Biosynthesis of secondary metabolites
sphm01120
Microbial metabolism in diverse environments
sphm01230
Biosynthesis of amino acids
Module
sphm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G432_10535
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G432_10535
Enzymes [BR:
sphm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
G432_10535
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGH49830
UniProt:
M4S1E5
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All DBs
Position
complement(2194343..2195617)
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AA seq
424 aa
AA seq
DB search
MDHFQLRDGVMHAEDVPLTLIAEAVGTPVYVYSTATIRRHVRVFQEALAGVESGPEGPLI
AYAVKANPNAGVLATLAREGLGADVVSAGELLRAIHAGVDPAKIVFSGVGKTADEMALAL
RHGIGQFNVESEPEAVMLSEVATALGMTAPIAFRINPDVDAGTHAKISTGKSDNKFGVAY
HRAVAAYAMARDLPGLAIQGVAVHIGSQLTDLAPLEAAFAKIGVLIATLRGEGHAISHAD
LGGGLGVPYDPALPPPPTPADYGAMVARVTAGWNVRLMFEPGRLIVANAGALMSRVIRVK
EGANAPFVIVDAAMNDLMRPALYEAWHDIRAIVPRSQRFAANVVGPVCESGDTFAMNRPM
DAVEAGDLVGFMTAGAYGATMASTYNSRPLTAEVMVDGNNWAVVRERLPVEALIAADTLP
PWLE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttccagcttcgcgacggcgtgatgcatgccgaggatgttcccctcaccctg
atcgccgaggcggtcggaaccccggtctacgtctattccaccgccacgatccgccggcat
gtccgcgtgttccaggaagcgctggcgggcgtggaatcgggaccggaagggccgctgatc
gcttatgcggtgaaggccaatcccaatgccggcgtgctggcgacgctggcccgcgagggg
ctgggcgcggacgtggtttcggcgggcgagctgctgcgcgccatccatgccggcgtcgat
cccgcgaagatcgtgttttcgggcgtgggcaagacggccgacgagatggcgctggcgctg
cgccacggcatcggccagttcaacgtcgaatccgaacccgaggcggtgatgctttcggag
gtggcgaccgcgctgggcatgaccgcgccgatcgccttccgcatcaaccccgatgtcgat
gccggcacccatgccaagatttccaccggcaagtccgacaacaagttcggcgtcgcctat
caccgcgcggtcgcggcctatgccatggcgcgcgacctgccgggcctcgccatccagggc
gtggcggtgcacatcggcagccagctgaccgatctcgccccgctggaggcggccttcgcc
aagatcggcgtgctgatcgccacgctgaggggcgagggccatgccatcagccatgccgac
ctgggcggcgggctgggcgtgccctatgatcccgctttgccgccgccgcccacgcccgcc
gattatggcgcgatggtcgcccgcgtcaccgccggctggaacgtgcggctgatgttcgag
cccggccggctgatcgtggccaatgccggcgcgctgatgtcccgcgtgatccgggtgaag
gagggcgcgaacgcccccttcgtgatcgtcgacgccgcgatgaacgacctgatgcgcccc
gctttgtatgaagcgtggcacgatatccgggcgatcgtcccgcgatcgcaacgatttgcc
gcgaacgtcgtcggcccggtctgtgagagcggcgataccttcgccatgaaccggccgatg
gacgccgtcgaggccggcgacctcgtcggcttcatgaccgccggggcctatggcgcgacg
atggccagcacgtacaatagccgcccgctgaccgccgaggtgatggtcgacggtaacaat
tgggctgtagtgcgggagaggttgcccgtggaggcgttgatcgcggcggacacgcttccg
ccgtggctggagtga
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