Sphingopyxis sp. MG: C3E99_09065
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Entry
C3E99_09065 CDS
T05382
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spho
Sphingopyxis sp. MG
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spho03019
]
C3E99_09065 (rnc)
03009 Ribosome biogenesis [BR:
spho03009
]
C3E99_09065 (rnc)
03036 Chromosome and associated proteins [BR:
spho03036
]
C3E99_09065 (rnc)
Enzymes [BR:
spho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
C3E99_09065 (rnc)
Messenger RNA biogenesis [BR:
spho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C3E99_09065 (rnc)
Ribosome biogenesis [BR:
spho03009
]
Eukaryotic type
90S particles
RNase
C3E99_09065 (rnc)
Prokaryotic type
rRNA processing factors
C3E99_09065 (rnc)
Chromosome and associated proteins [BR:
spho03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
C3E99_09065 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AVA13969
UniProt:
A0A2L0VQ00
LinkDB
All DBs
Position
1943225..1943908
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AA seq
227 aa
AA seq
DB search
MSEGASAETIAAITGAPPGDLGLYHRALTHGSSGAGDYQRLEFLGDRVLGLVIASELFRR
FPKASEGELSSRLHALASGETCARIAQRLDLNAHVRFGAQAISDGGRQSDNVAADVLEAL
IGALWLDRGEVAARAFIVREWGAMIEGQTAAPKHPKAALQEWALARKRRPPEYRLVRREG
PDHAPRFRVAVAVGKLAEAEGEGASKQAAEKAAAAALLDRLTQEEKQ
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaaggcgcgtccgccgaaaccatcgccgcgatcaccggcgcgccgcccggcgac
cttggcctctatcaccgcgcgctgacccatggcagcagcggcgcgggcgattatcagcgg
cttgaattcctgggcgaccgggtgctggggctggtgatcgcgtccgagctgttccgccgg
tttccgaaagcgagcgagggcgagctttcgtcgcgcctgcacgcgctggcatcgggcgaa
acctgtgcgcgcatcgcgcagcggctcgacctcaacgcacatgtccgcttcggcgcgcag
gcgatcagcgacggcgggcggcagagcgacaatgtcgccgccgacgtgctcgaagcgctg
atcggcgcgctgtggctcgaccggggcgaggtggcggcacgcgccttcatcgtccgcgaa
tggggcgcgatgatcgaggggcagaccgcggcgcccaagcatcccaaggcggcgctccag
gaatgggcgctcgcccgcaagcggcgtccgcccgaatatcgcctcgtccgccgcgaaggc
cccgaccatgcgccgcgctttcgcgtcgcggtcgcggtcggcaagctcgccgaggccgaa
ggcgaaggcgcatcgaagcaggcggccgaaaaggccgcggcggccgctctgctcgaccgg
ctgacacaggaagagaaacaatga
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