Sphingopyxis sp. 113P3: LH20_10770
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Entry
LH20_10770 CDS
T04069
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00250
Alanine, aspartate and glutamate metabolism
sphp00310
Lysine degradation
sphp00350
Tyrosine metabolism
sphp00650
Butanoate metabolism
sphp00760
Nicotinate and nicotinamide metabolism
sphp01100
Metabolic pathways
sphp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LH20_10770 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LH20_10770 (gabD)
00310 Lysine degradation
LH20_10770 (gabD)
00350 Tyrosine metabolism
LH20_10770 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
LH20_10770 (gabD)
Enzymes [BR:
sphp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
LH20_10770 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
LH20_10770 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
LH20_10770 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ALC12434
UniProt:
A0A0M4CUM0
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Position
complement(2168587..2170050)
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AA seq
487 aa
AA seq
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MSDAWLSRPDLLRTEGFIAGRWEESDTRYDVLNPATGACLARVTQHGAEAATRAVDAASA
ALAAWSATTASERAAILRRWHELVLESAEDLARLMTAEQGKPLAEARGEVAYAASFLLWF
AEEARRVYGSVIPGNAPTRRLTVIRQPVGVVAAITPWNFPAAMITRKVAPALAVGCTVVL
KPSELTPLSALALAHLGAEAGVPPGVFNVVSGEAPAIGEVLTGDPRVRKFSFTGSTAVGK
MLAAKCMATVKRVSLELGGNAPFIVFDDADIDAAVSGAIASKFRNSGQTCVCANRFLVQD
GIYDRFAAALARKVGMLNAGDGLAGASDQGPLINAAAVAKVERHCADAVERGARILARGQ
VSGPPEGHFARATLLVDVAPDALLVREETFGPLAGLIRFDHEEEAIRLANDTPAGLAAYL
FTADHSRATRVSEALEYGMVGLNTGLISTEVAPFGGIKESGFGREGSQFGIDDYVSIKLV
VAEIAPA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgcctggctttcgcgccccgaccttctgcgaaccgagggatttattgctggg
cgctgggaagagagcgatacccgctacgatgtgctgaacccggcgacgggtgcctgcctc
gcgcgtgtgacgcagcatggcgccgaggcggcgacgcgcgcagtcgatgcggcgagcgca
gcgctcgccgcatggtcagccacgacagcaagcgagcgcgccgccatacttcgccgctgg
cacgagcttgttctcgaaagcgccgaggatcttgcccggctgatgaccgccgagcagggc
aagccgctcgcagaagcaaggggcgaagtcgcctatgccgcctcctttctcctctggttc
gccgaagaggcgcggcgggtctatggctcggtcattcccggcaatgcccccacccggcgt
ctcacggtgatacgccagccggttggcgtcgtcgcggcgattaccccctggaactttcct
gccgccatgatcacgcgcaaggtcgcccctgccctggccgtcggctgcacggtcgttctc
aagccttcggaactgaccccgctctccgccctggcgcttgctcatctcggcgccgaggcg
ggcgtaccgccgggcgtcttcaatgtcgtctcgggcgaggcgcccgcgatcggcgaggtc
ctcaccggggacccgcgcgtgcgcaagttcagcttcacgggctcgacggcggtcgggaaa
atgcttgcagcaaagtgcatggcgacggtcaagcgcgtctcgctcgaacttggcggcaat
gcgcccttcattgtctttgacgatgccgatatcgacgcggccgtttcgggcgccatcgcc
tccaaattccgcaacagcgggcagacgtgcgtgtgcgccaatcgtttccttgttcaggac
ggaatatacgaccgcttcgctgccgcgctcgcccgaaaggtcggaatgctgaacgcaggc
gatggcctcgcgggcgcgagtgatcagggcccgctcatcaatgccgcagcggtggcaaag
gttgaacgtcactgcgccgacgcagtcgaacgcggcgcgcggattcttgcccggggtcag
gtcagcggtccgcccgagggacatttcgcccgggcgacgctcctcgttgacgttgcgccc
gacgcgctcctcgtgcgcgaggagaccttcggccctcttgccggactgatccgcttcgac
catgaggaagaagcgatccggctcgccaatgatacgcccgcggggctcgccgcctatctg
ttcacggcggaccacagccgcgcaacgagggtcagcgaagccctcgaatatggaatggtc
ggcctcaacactgggcttatttccaccgaggtcgcgccctttggcgggatcaaggaatca
gggttcggtcgggaagggtcgcaattcgggatcgacgactatgtgtcgatcaagctcgtt
gtcgcggagattgcgcccgcatga
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